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Aliases for LOC105374344 Gene

Subcategory (RNA class) for LOC105374344 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374344 Gene

  • Uncharacterized LOC105374344 3
  • AC092535.3 5

External Ids for LOC105374344 Gene

Previous GeneCards Identifiers for LOC105374344 Gene

  • GC04U902145

Summaries for LOC105374344 Gene

GeneCards Summary for LOC105374344 Gene

LOC105374344 (Uncharacterized LOC105374344) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374344 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374344 Gene

Genomics for LOC105374344 Gene

GeneHancer (GH) Regulatory Elements for LOC105374344 Gene

Promoters and enhancers for LOC105374344 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I001114 Promoter 0.9 EPDnew 550.8 -0.1 -67 0.1 RING1 E2F1 POLR2A NRF1 MAX E2F6 EZH2 CHD2 LOC105374344 RNF212 LOC100129917 ZNF141 ZNF718 ZNF876P NELFA CTBP1-AS2 ZNF732 LOC100288172
GH04I001113 Promoter 0.7 Ensembl 550.8 +0.3 262 0.2 RING1 E2F1 CHD2 LOC105374344 RNF212 LOC100129917 ZNF141 ZNF718 ZNF876P NELFA CTBP1-AS2 ZNF732 LOC100288172
GH04I001212 Enhancer 1.2 Ensembl ENCODE dbSUPER 10.8 +102.4 102392 8 HDGF PKNOX1 SMAD1 BMI1 BATF IRF4 ZNF207 ATF7 ETV6 BCLAF1 CTBP1-AS2 CRIPAK UVSSA MAEA CTBP1 LOC105374344 RNF212 CTBP1-AS
GH04I001153 Enhancer 0.5 dbSUPER 11.7 +41.7 41671 3 ZFHX2 KLF1 EGR1 BHLHE40 CREB1 EGR2 TMED11P SPON2 RNF212 LOC105374344 ENSG00000251639 PIR56304 GC04P001147
GH04I001228 Enhancer 0.4 dbSUPER 11.2 +115.8 115778 1.9 ZFHX2 POLR2A EGR2 CRIPAK CTBP1-AS2 SPON2 CTBP1 MAEA LOC105374344 RNF212 CTBP1-AS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374344 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374344 Gene

Genomic Locations for LOC105374344 Gene
chr4:1,113,639-1,132,977
(GRCh38/hg38)
Size:
19,339 bases
Orientation:
Plus strand
chr4:1,107,427-1,126,765
(GRCh37/hg19)

Genomic View for LOC105374344 Gene

Genes around LOC105374344 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374344 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374344 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374344 Gene

Proteins for LOC105374344 Gene

Post-translational modifications for LOC105374344 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374344 Gene

Domains & Families for LOC105374344 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374344 Gene

Function for LOC105374344 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374344 Gene

Localization for LOC105374344 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374344 Gene

Pathways & Interactions for LOC105374344 Gene

SuperPathways for LOC105374344 Gene

No Data Available

Interacting Proteins for LOC105374344 Gene

Gene Ontology (GO) - Biological Process for LOC105374344 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374344 Gene

Drugs & Compounds for LOC105374344 Gene

No Compound Related Data Available

Transcripts for LOC105374344 Gene

mRNA/cDNA for LOC105374344 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374344 Gene

No ASD Table

Relevant External Links for LOC105374344 Gene

GeneLoc Exon Structure for
LOC105374344

Expression for LOC105374344 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374344 Gene

Orthologs for LOC105374344 Gene

Evolution for LOC105374344 Gene

ENSEMBL:
Gene Tree for LOC105374344 (if available)
TreeFam:
Gene Tree for LOC105374344 (if available)

No data available for Orthologs for LOC105374344 Gene

Paralogs for LOC105374344 Gene

No data available for Paralogs for LOC105374344 Gene

Variants for LOC105374344 Gene

Sequence variations from dbSNP and Humsavar for LOC105374344 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000027289 -- 1,118,129(+) G/C/T intron_variant
rs1000215562 -- 1,115,555(+) A/G intron_variant
rs10002248 -- 1,124,955(+) A/G intron_variant
rs1000258526 -- 1,115,395(+) A/T intron_variant
rs1000351746 -- 1,127,901(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374344 Gene

Disorders for LOC105374344 Gene

Additional Disease Information for LOC105374344

No disorders were found for LOC105374344 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105374344 Gene

Publications for LOC105374344 Gene

No publications were found for LOC105374344 Gene.

Products for LOC105374344 Gene

Sources for LOC105374344 Gene

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