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Aliases for LOC105374284 Gene

Subcategory (RNA class) for LOC105374284 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374284 Gene

  • Uncharacterized LOC105374284 3

External Ids for LOC105374284 Gene

Previous GeneCards Identifiers for LOC105374284 Gene

  • GC03U902511

Summaries for LOC105374284 Gene

GeneCards Summary for LOC105374284 Gene

LOC105374284 (Uncharacterized LOC105374284) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374284 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374284 Gene

Genomics for LOC105374284 Gene

GeneHancer (GH) Regulatory Elements for LOC105374284 Gene

Promoters and enhancers for LOC105374284 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J193836 Enhancer 0.8 dbSUPER 650.7 +0.7 671 1.1 HDAC1 PKNOX1 ATF1 TCF12 EGR1 SMARCA5 SMAD5 REST ZEB2 ELF1 GC03P193839 LOC105374284 LOC105374283
GH03J193834 Enhancer 1 ENCODE dbSUPER 0.7 +3.3 3268 1 ESRRA NFIB EBF1 BATF IRF4 RAD21 RELA CTBP1 GATA3 FOS ENSG00000232874 GP5 LOC105374284 LOC105374283
GH03J193828 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.4 7352 5 PKNOX1 NFIB ZSCAN4 ZNF133 NEUROD1 SIN3A FEZF1 IRF4 RFX5 RCOR1 LSG1 ENSG00000232874 OPA1-AS1 LOC105374284 LOC105374283
GH03J193825 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +11.8 11779 2.3 CTCF PKNOX1 NFIB ARNT BACH1 BMI1 ZIC2 RFX5 FOSL1 ZNF766 HES1 ENSG00000232874 LOC105374284 LOC105374283
GH03J193815 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +21.1 21132 2.3 HDAC1 PKNOX1 TAF9B SIN3A NFXL1 ETS1 TCF12 EGR1 ZFP91 EGR2 LOC105374284 LOC105374283
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105374284 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374284 Gene

Genomic Locations for LOC105374284 Gene
chr3:193,832,779-193,838,008
(GRCh38/hg38)
Size:
5,230 bases
Orientation:
Minus strand

Genomic View for LOC105374284 Gene

Genes around LOC105374284 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374284 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374284 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374284 Gene

Proteins for LOC105374284 Gene

Post-translational modifications for LOC105374284 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374284 Gene

Domains & Families for LOC105374284 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374284 Gene

Function for LOC105374284 Gene

Phenotypes From GWAS Catalog for LOC105374284 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374284 Gene

Localization for LOC105374284 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374284 Gene

Pathways & Interactions for LOC105374284 Gene

SuperPathways for LOC105374284 Gene

No Data Available

Interacting Proteins for LOC105374284 Gene

Gene Ontology (GO) - Biological Process for LOC105374284 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374284 Gene

Drugs & Compounds for LOC105374284 Gene

No Compound Related Data Available

Transcripts for LOC105374284 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374284 Gene

No ASD Table

Relevant External Links for LOC105374284 Gene

GeneLoc Exon Structure for
LOC105374284

No data available for mRNA/cDNA for LOC105374284 Gene

Expression for LOC105374284 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374284 Gene

Orthologs for LOC105374284 Gene

No data available for Orthologs and Evolution for LOC105374284 Gene

Paralogs for LOC105374284 Gene

No data available for Paralogs for LOC105374284 Gene

Variants for LOC105374284 Gene

Sequence variations from dbSNP and Humsavar for LOC105374284 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000687688 -- 193,835,647(-) A/C intron_variant
rs1000994990 -- 193,835,654(-) C/T intron_variant
rs1001411167 -- 193,836,722(-) T/C intron_variant
rs1001852039 -- 193,832,601(-) G/A downstream_transcript_variant
rs1003037316 -- 193,838,118(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374284 Gene

Disorders for LOC105374284 Gene

No disorders were found for LOC105374284 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374284 Gene

Publications for LOC105374284 Gene

No publications were found for LOC105374284 Gene.

Products for LOC105374284 Gene

Sources for LOC105374284 Gene

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