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Aliases for LOC105374283 Gene

Subcategory (RNA class) for LOC105374283 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374283 Gene

  • Uncharacterized LOC105374283 3

External Ids for LOC105374283 Gene

Previous GeneCards Identifiers for LOC105374283 Gene

  • GC03U902335

Summaries for LOC105374283 Gene

GeneCards Summary for LOC105374283 Gene

LOC105374283 (Uncharacterized LOC105374283) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374283 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374283 Gene

Genomics for LOC105374283 Gene

GeneHancer (GH) Regulatory Elements for LOC105374283 Gene

Promoters and enhancers for LOC105374283 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J193788 Enhancer 0.8 ENCODE 650.7 +1.7 1724 1.5 RB1 NFRKB ARID4B BMI1 ZNF2 RAD21 RFX5 RARA ZNF143 RCOR1 LOC105374283 LOC105374284
GH03J193780 Enhancer 1.1 Ensembl ENCODE 0.7 -4.9 -4911 3.8 HDGF ZNF2 TCF12 ZNF121 ARID2 FOS ATF7 NCOA1 REST ZNF592 ENSG00000229964 ENSG00000233987 LINC01972 ENSG00000232874 GP5 LOC105374283 LOC105374282
GH03J193828 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +43.4 43407 5 PKNOX1 NFIB ZSCAN4 ZNF133 NEUROD1 SIN3A FEZF1 IRF4 RFX5 RCOR1 LSG1 ENSG00000232874 OPA1-AS1 LOC105374284 LOC105374283
GH03J193790 Enhancer 0.6 ENCODE 0.7 +4.3 4298 1.1 SMARCE1 CTCF ZNF687 NEUROD1 DPF2 ELF1 MNT ZNF592 ZNF217 CTBP1 LOC105374283 LOC105374284
GH03J193805 Enhancer 1 ENCODE dbSUPER 0.4 +18.4 18428 0.2 PKNOX1 FOXA2 NFIB INSM2 ZNF2 RAD21 RFX5 ZNF335 ZNF213 RCOR1 ENSG00000232874 CPN2 GP5 LOC105374283 LOC105374284
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105374283 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374283 Gene

Genomic Locations for LOC105374283 Gene
chr3:193,787,249-193,792,084
(GRCh38/hg38)
Size:
4,836 bases
Orientation:
Plus strand

Genomic View for LOC105374283 Gene

Genes around LOC105374283 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374283 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374283 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374283 Gene

Proteins for LOC105374283 Gene

Post-translational modifications for LOC105374283 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374283 Gene

Domains & Families for LOC105374283 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374283 Gene

Function for LOC105374283 Gene

Phenotypes From GWAS Catalog for LOC105374283 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374283 Gene

Localization for LOC105374283 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374283 Gene

Pathways & Interactions for LOC105374283 Gene

SuperPathways for LOC105374283 Gene

No Data Available

Interacting Proteins for LOC105374283 Gene

Gene Ontology (GO) - Biological Process for LOC105374283 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374283 Gene

Drugs & Compounds for LOC105374283 Gene

No Compound Related Data Available

Transcripts for LOC105374283 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374283 Gene

No ASD Table

Relevant External Links for LOC105374283 Gene

GeneLoc Exon Structure for
LOC105374283

No data available for mRNA/cDNA for LOC105374283 Gene

Expression for LOC105374283 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374283 Gene

Orthologs for LOC105374283 Gene

No data available for Orthologs and Evolution for LOC105374283 Gene

Paralogs for LOC105374283 Gene

No data available for Paralogs for LOC105374283 Gene

Variants for LOC105374283 Gene

Sequence variations from dbSNP and Humsavar for LOC105374283 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000293821 -- 193,786,646(+) A/G/T upstream_transcript_variant
rs1000767258 -- 193,791,798(+) A/G intron_variant
rs1000796826 -- 193,792,173(+) G/A downstream_transcript_variant
rs1001576658 -- 193,787,328(+) A/G non_coding_transcript_variant
rs1001719603 -- 193,785,802(+) C/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374283 Gene

Disorders for LOC105374283 Gene

No disorders were found for LOC105374283 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374283 Gene

Publications for LOC105374283 Gene

No publications were found for LOC105374283 Gene.

Products for LOC105374283 Gene

Sources for LOC105374283 Gene

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