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Aliases for LOC105374282 Gene

Subcategory (RNA class) for LOC105374282 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105374282 Gene

  • Uncharacterized LOC105374282 3

External Ids for LOC105374282 Gene

Previous GeneCards Identifiers for LOC105374282 Gene

  • GC03U902662

Summaries for LOC105374282 Gene

GeneCards Summary for LOC105374282 Gene

LOC105374282 (Uncharacterized LOC105374282) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374282 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374282 Gene

Genomics for LOC105374282 Gene

GeneHancer (GH) Regulatory Elements for LOC105374282 Gene

Promoters and enhancers for LOC105374282 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J193771 Enhancer 0.6 VISTA 650.7 -0.2 -182 2 ZFP91 ZBTB33 SETDB1 PIR33857 LOC105374282 ENSG00000232874 GP5 LOC105374283
GH03J193780 Enhancer 1.1 Ensembl ENCODE 0.4 -10.0 -9963 3.8 HDGF ZNF2 TCF12 ZNF121 ARID2 FOS ATF7 NCOA1 REST ZNF592 ENSG00000229964 ENSG00000233987 LINC01972 ENSG00000232874 GP5 LOC105374283 LOC105374282
GH03J193776 Enhancer 0.6 ENCODE 0.7 -3.1 -3106 0.8 USF1 NANOG MAX SIN3A THRB SP1 POLR2A POU5F1 NR2F6 HES1 ENSG00000232874 LOC105374282 LOC105374283
GH03J193775 Enhancer 0.5 ENCODE 0.7 -3.6 -3612 0.2 SP1 USF1 POLR2A NANOG SCRT2 MAX SIN3A HES1 ENSG00000232874 LOC105374282 LOC105374283
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105374282 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374282 Gene

Genomic Locations for LOC105374282 Gene
chr3:193,770,959-193,772,375
(GRCh38/hg38)
Size:
1,417 bases
Orientation:
Minus strand

Genomic View for LOC105374282 Gene

Genes around LOC105374282 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374282 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374282 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374282 Gene

Proteins for LOC105374282 Gene

Post-translational modifications for LOC105374282 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374282 Gene

Domains & Families for LOC105374282 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374282 Gene

Function for LOC105374282 Gene

Phenotypes From GWAS Catalog for LOC105374282 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374282 Gene

Localization for LOC105374282 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374282 Gene

Pathways & Interactions for LOC105374282 Gene

SuperPathways for LOC105374282 Gene

No Data Available

Interacting Proteins for LOC105374282 Gene

Gene Ontology (GO) - Biological Process for LOC105374282 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374282 Gene

Drugs & Compounds for LOC105374282 Gene

No Compound Related Data Available

Transcripts for LOC105374282 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374282 Gene

No ASD Table

Relevant External Links for LOC105374282 Gene

GeneLoc Exon Structure for
LOC105374282

No data available for mRNA/cDNA for LOC105374282 Gene

Expression for LOC105374282 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374282 Gene

Orthologs for LOC105374282 Gene

No data available for Orthologs and Evolution for LOC105374282 Gene

Paralogs for LOC105374282 Gene

No data available for Paralogs for LOC105374282 Gene

Variants for LOC105374282 Gene

Sequence variations from dbSNP and Humsavar for LOC105374282 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000449337 -- 193,772,789(-) A/T upstream_transcript_variant
rs1001050290 -- 193,771,168(-) T/G non_coding_transcript_variant
rs1001273204 -- 193,770,847(-) A/G downstream_transcript_variant
rs1003130272 -- 193,770,709(-) T/C downstream_transcript_variant
rs1003608694 -- 193,772,688(-) C/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374282 Gene

Disorders for LOC105374282 Gene

No disorders were found for LOC105374282 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374282 Gene

Publications for LOC105374282 Gene

No publications were found for LOC105374282 Gene.

Products for LOC105374282 Gene

Sources for LOC105374282 Gene

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