Aliases for LOC105374179 Gene

Subcategory (RNA class) for LOC105374179 Gene

ncRNA

Aliases for LOC105374179 Gene

  • Uncharacterized LOC105374179 3

External Ids for LOC105374179 Gene

Previous GeneCards Identifiers for LOC105374179 Gene

  • GC03U902415

Summaries for LOC105374179 Gene

GeneCards Summary for LOC105374179 Gene

LOC105374179 (Uncharacterized LOC105374179) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374179 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105374179 Gene

Genomics for LOC105374179 Gene

GeneHancer (GH) Regulatory Elements for LOC105374179 Gene

Promoters and enhancers for LOC105374179 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J157241 Enhancer 0.2 FANTOM5 500.7 +0.4 399 0 LOC105374179 lnc-CCNL1-4 ENSG00000243176 LOC101928236
GH03J157248 Enhancer 1.6 VISTA Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -7.8 -7839 6.3 ZSCAN5C JUND FOS TRIM28 MEF2A WT1 FOSL1 ATF3 CEBPB JUN KRT18P34 ENSG00000243176 VEPH1 LOC105374179 lnc-CCNL1-5 LOC101928236
GH03J157239 Enhancer 0.9 ENCODE dbSUPER 0.7 +2.8 2824 0.2 CTCF REST RAD21 CTBP1 TRIM22 SMC3 SMARCA5 IRF2 ZBTB48 IRF4 LOC105374179 lnc-CCNL1-4 ENSG00000243176 LOC101928236
GH03J157274 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -32.5 -32490 3.6 ZSCAN5C CUX1 OSR2 HDAC2 NANOG TCF12 PBX2 ETS1 ZNF610 IKZF3 KRT18P34 ENSG00000243176 LOC105374179 lnc-CCNL1-5 LOC101928236 VEPH1
GH03J157290 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -48.8 -48790 3 JUND FOS CEBPB STAT3 EP300 POLR2A FOXP2 PRDM6 MEIS2 SIN3A KRT18P34 ENSG00000243176 lnc-CCNL1-5 LOC105374179 LOC101928236 VEPH1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105374179 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374179 Gene

Genomic Locations for LOC105374179 Gene
chr3:157,234,309-157,242,111
(GRCh38/hg38)
Size:
7,803 bases
Orientation:
Minus strand

Genomic View for LOC105374179 Gene

Genes around LOC105374179 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374179 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374179 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374179 Gene

Proteins for LOC105374179 Gene

Post-translational modifications for LOC105374179 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374179 Gene

Domains & Families for LOC105374179 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105374179 Gene

Function for LOC105374179 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374179 Gene

Localization for LOC105374179 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374179 Gene

Pathways & Interactions for LOC105374179 Gene

PathCards logo

SuperPathways for LOC105374179 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105374179 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105374179 Gene

Drugs & Compounds for LOC105374179 Gene

No Compound Related Data Available

Transcripts for LOC105374179 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374179 Gene

No ASD Table

Relevant External Links for LOC105374179 Gene

GeneLoc Exon Structure for
LOC105374179

No data available for mRNA/cDNA for LOC105374179 Gene

Expression for LOC105374179 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374179 Gene

Orthologs for LOC105374179 Gene

No data available for Orthologs and Evolution for LOC105374179 Gene

Paralogs for LOC105374179 Gene

No data available for Paralogs for LOC105374179 Gene

Variants for LOC105374179 Gene

Additional dbSNP identifiers (rs#s) for LOC105374179 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374179 Gene

Disorders for LOC105374179 Gene

No disorders were found for LOC105374179 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374179 Gene

Publications for LOC105374179 Gene

No publications were found for LOC105374179 Gene.

No data available for Mastermind for LOC105374179 Gene

Products for LOC105374179 Gene

Sources for LOC105374179 Gene