Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105374041 Gene

Subcategory (RNA class) for LOC105374041 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374041 Gene

  • Uncharacterized LOC105374041 3
  • AC092894.1 5

External Ids for LOC105374041 Gene

Previous GeneCards Identifiers for LOC105374041 Gene

  • GC03U902390

Summaries for LOC105374041 Gene

GeneCards Summary for LOC105374041 Gene

LOC105374041 (Uncharacterized LOC105374041) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374041 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374041 Gene

Genomics for LOC105374041 Gene

GeneHancer (GH) Regulatory Elements for LOC105374041 Gene

Promoters and enhancers for LOC105374041 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I112407 Enhancer 0.6 ENCODE 550.8 +1.7 1713 0.8 SRF ZNF687 NR2F1 TRIM22 EBF1 ELF1 RELA ZNF217 TARDBP IKZF1 LOC105374041 CD200 GC03M112363
GH03I112409 Enhancer 0.4 ENCODE 550.8 +1.0 1013 0 JUNB CEBPG BATF LOC105374041 CD200 GC03M112363
GH03I112408 Enhancer 0.2 ENCODE 550.8 +0.2 207 0.8 LOC105374041 CD200 GC03M112363
GH03I112389 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +18.1 18076 3.4 SOX13 SRF PKNOX1 JUN ETS1 SP1 JUND POU5F1 RUNX3 CD200 BTLA MIR567 C3orf52 LOC105374041 GC03M112363
GH03I112406 Enhancer 0.5 Ensembl 0.8 +3.0 3033 0.2 NR2F1 RUNX3 ZNF592 SPI1 CD200 LOC105374041 GC03M112363
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105374041 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105374041 Gene

Genomic Locations for LOC105374041 Gene
chr3:112,375,689-112,409,134
(GRCh38/hg38)
Size:
33,446 bases
Orientation:
Minus strand
chr3:112,115,494-112,127,981
(GRCh37/hg19)

Genomic View for LOC105374041 Gene

Genes around LOC105374041 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374041 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374041 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374041 Gene

Proteins for LOC105374041 Gene

Post-translational modifications for LOC105374041 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374041 Gene

Domains & Families for LOC105374041 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374041 Gene

Function for LOC105374041 Gene

Phenotypes From GWAS Catalog for LOC105374041 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374041 Gene

Localization for LOC105374041 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374041 Gene

Pathways & Interactions for LOC105374041 Gene

SuperPathways for LOC105374041 Gene

No Data Available

Interacting Proteins for LOC105374041 Gene

Gene Ontology (GO) - Biological Process for LOC105374041 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374041 Gene

Drugs & Compounds for LOC105374041 Gene

No Compound Related Data Available

Transcripts for LOC105374041 Gene

mRNA/cDNA for LOC105374041 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374041 Gene

No ASD Table

Relevant External Links for LOC105374041 Gene

GeneLoc Exon Structure for
LOC105374041

Expression for LOC105374041 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374041 Gene

Orthologs for LOC105374041 Gene

Evolution for LOC105374041 Gene

ENSEMBL:
Gene Tree for LOC105374041 (if available)
TreeFam:
Gene Tree for LOC105374041 (if available)

No data available for Orthologs for LOC105374041 Gene

Paralogs for LOC105374041 Gene

No data available for Paralogs for LOC105374041 Gene

Variants for LOC105374041 Gene

Sequence variations from dbSNP and Humsavar for LOC105374041 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000284723 -- 112,383,485(-) T/G intron_variant
rs1000337542 -- 112,383,720(-) C/A/T intron_variant
rs1000523391 -- 112,390,236(-) A/G intron_variant
rs1000671230 -- 112,382,589(-) G/T intron_variant
rs1000821129 -- 112,376,663(-) A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105374041 Gene

Disorders for LOC105374041 Gene

No disorders were found for LOC105374041 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374041 Gene

Publications for LOC105374041 Gene

No publications were found for LOC105374041 Gene.

Products for LOC105374041 Gene

Sources for LOC105374041 Gene

Content
Loading form....