Aliases for LOC105373978 Gene

Data sources for LOC105373978 Gene:

Subcategory (RNA class) for LOC105373978 Gene

ncRNA

Aliases for LOC105373978 Gene

External Ids for LOC105373978 Gene

Previous GeneCards Identifiers for LOC105373978 Gene

  • GC02U903629

Summaries for LOC105373978 Gene

GeneCards Summary for LOC105373978 Gene

LOC105373978 (Uncharacterized LOC105373978) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373978 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373978 Gene

Genomics for LOC105373978 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105373978 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J241880 Promoter/Enhancer 2 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 -0.7 -712 3.1 ZSCAN16 ZBTB10 SP1 MXD4 FEZF1 MNT MBD2 ZNF217 BHLHE40 ZBTB7B LINC01237 LOC105373978 ENSG00000224272 MTERF4 ING5 ATG4B SNED1 NEU4 HSALNG0023736 RTP5
GH02J241879 Enhancer 0.2 Ensembl 250.7 +1.8 1790 0.2 LOC105373978 LINC01237 ENSG00000224272 piR-38005-038 HSALNG0023736 RTP5 FAM240C
GH02J241878 Enhancer 0.9 Ensembl ENCODE 0.7 +2.9 2891 1.2 CTCF ZEB1 THAP11 ZNF740 VEZF1 TRIM22 SAP130 SMC3 RAD21 MAZ NEU4 ENSG00000224272 LOC105373978 piR-38005-038 RTP5 FAM240C
GH02J241875 Enhancer 0.7 Ensembl 0.4 +5.4 5357 0.9 REST CTCF TRIM22 BHLHE40 MLLT1 ELF1 ZBTB33 RB1 IKZF1 KLF5 HSALNG0023735 piR-38005-038 ENSG00000224272 LOC105373978 RTP5 FAM240C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373978 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105373978 Gene

Latest Assembly
chr2:241,879,040-241,881,291
(GRCh38/hg38)
Size:
2,252 bases
Orientation:
Minus strand

Genomic View for LOC105373978 Gene

Genes around LOC105373978 on UCSC Golden Path with GeneCards custom track
LOC105373978 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105373978 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373978 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373978 Gene

Proteins for LOC105373978 Gene

Post-translational modifications for LOC105373978 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373978 Gene

Domains & Families for LOC105373978 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373978 Gene

Function for LOC105373978 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373978 Gene

Localization for LOC105373978 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373978 Gene

Pathways & Interactions for LOC105373978 Gene

PathCards logo

SuperPathways for LOC105373978 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373978 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373978 Gene

Drugs & Compounds for LOC105373978 Gene

No Compound Related Data Available

Transcripts for LOC105373978 Gene

LOC105373978 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373978 Gene

No ASD Table

Relevant External Links for LOC105373978 Gene

GeneLoc Exon Structure for
LOC105373978

No data available for mRNA/cDNA for LOC105373978 Gene

Expression for LOC105373978 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373978 Gene

Orthologs for LOC105373978 Gene

No data available for Orthologs and Evolution for LOC105373978 Gene

Paralogs for LOC105373978 Gene

No data available for Paralogs for LOC105373978 Gene

Variants for LOC105373978 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105373978 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373978 Gene

Disorders for LOC105373978 Gene

No disorders were found for LOC105373978 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373978 Gene

Publications for LOC105373978 Gene

No publications were found for LOC105373978 Gene.

No data available for Mastermind for LOC105373978 Gene

Products for LOC105373978 Gene

Sources for LOC105373978 Gene