LOC105373975 Gene (RNA Gene)

Uncharacterized LOC105373975

GC02M241574
GIFtS:
1
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Aliases for LOC105373975 Gene

Data sources for LOC105373975 Gene:

Subcategory (RNA class) for LOC105373975 Gene

ncRNA

Aliases for LOC105373975 Gene

External Ids for LOC105373975 Gene

Previous GeneCards Identifiers for LOC105373975 Gene

  • GC02U903822

Summaries for LOC105373975 Gene

GeneCards Summary for LOC105373975 Gene

LOC105373975 (Uncharacterized LOC105373975) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373975 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373975 Gene

Genomics for LOC105373975 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105373975 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02J241584 Enhancer 0.8 Ensembl ENCODE 250.7 -1.3 -1259 0.9 ELF1 ZNF316 NFE2 NFE2L2 MAFG MAFF RFX1 CSDE1 CREB1 ATF3 LOC105373975 RF00001-186 RNA5SP122 BOK BOK-AS1 ANO7 PASK PPP1R7 ENSG00000229996 lnc-DTYMK-6
GH02J241563 Enhancer 0.8 Ensembl ENCODE 0.4 +19.1 19126 1.5 ZIC2 SMAD4 CTCF NR2F6 GLIS1 KLF1 ARID4B HNRNPL EGR2 ZBTB33 ANO7 ING5 BOK BOK-AS1 MK328046 lnc-ATG4B-2 LOC105373975 ATG4B
GH02J241565 Enhancer 0.6 Ensembl CraniofacialAtlas 0.4 +17.9 17943 0.4 ZIC2 GLIS1 GLIS2 HDGF BOK ANO7 ATG4B BOK-AS1 MK328046 lnc-ATG4B-2 LOC105373975
GH02J241577 Enhancer 0.2 ENCODE 0.4 +5.8 5815 0.2 HSALNG0023702 HSALNG0023700 LOC105373975 lnc-ATG4B-2 BOK ATG4B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373975 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105373975 Gene

Latest Assembly
chr2:241,564,144-241,583,536
(GRCh38/hg38)
Size:
19,393 bases
Orientation:
Minus strand

Genomic View for LOC105373975 Gene

Genes around LOC105373975 on UCSC Golden Path with GeneCards custom track
LOC105373975 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105373975 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373975 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105373975 Gene

Proteins for LOC105373975 Gene

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  2. Protein products for research
  3. Assay products for research

Post-translational modifications for LOC105373975 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373975 Gene

Domains & Families for LOC105373975 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373975 Gene

Function for LOC105373975 Gene

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  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373975 Gene

Localization for LOC105373975 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373975 Gene

Pathways & Interactions for LOC105373975 Gene

PathCards logo

SuperPathways for LOC105373975 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373975 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373975 Gene

Drugs & Compounds for LOC105373975 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for LOC105373975 Gene

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  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research
LOC105373975 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373975 Gene

No ASD Table

Relevant External Links for LOC105373975 Gene

GeneLoc Exon Structure for
LOC105373975

No data available for mRNA/cDNA for LOC105373975 Gene

Expression for LOC105373975 Gene

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  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373975 Gene

Orthologs for LOC105373975 Gene

No data available for Orthologs and Evolution for LOC105373975 Gene

Paralogs for LOC105373975 Gene

No data available for Paralogs for LOC105373975 Gene

Variants for LOC105373975 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105373975 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373975 Gene

Disorders for LOC105373975 Gene

No disorders were found for LOC105373975 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373975 Gene

Publications for LOC105373975 Gene

No publications were found for LOC105373975 Gene.

No data available for Mastermind for LOC105373975 Gene

Products for LOC105373975 Gene

Sources for LOC105373975 Gene