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Aliases for LOC105373960 Gene

Subcategory (RNA class) for LOC105373960 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105373960 Gene

  • Uncharacterized LOC105373960 3

External Ids for LOC105373960 Gene

Previous GeneCards Identifiers for LOC105373960 Gene

  • GC02U903285

Summaries for LOC105373960 Gene

GeneCards Summary for LOC105373960 Gene

LOC105373960 (Uncharacterized LOC105373960) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373960 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373960 Gene

Genomics for LOC105373960 Gene

GeneHancer (GH) Regulatory Elements for LOC105373960 Gene

Promoters and enhancers for LOC105373960 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J237935 Enhancer 0.8 Ensembl ENCODE 600.7 -1.9 -1872 0.7 ZNF148 TRIM24 IKZF1 ZNF316 CTBP1 TRIM28 CEBPB CEBPG ZEB2 JUND LOC105373960 UBE2F RAMP1 PIR38971 GC02P237982 GC02P237977 GC02P237963
GH02J237932 Enhancer 0.2 ENCODE 600.7 +1.3 1273 0.1 LOC105373960 UBE2F RAMP1 ENSG00000263723
GH02J237933 Enhancer 0.2 Ensembl 600.7 +1.0 997 0.4 LOC105373960 UBE2F RAMP1 ENSG00000263723
GH02J237894 Enhancer 1.7 VISTA FANTOM5 ENCODE dbSUPER 0.3 +37.1 37101 5.5 SP1 ZNF687 CREM MLLT1 IKZF1 POLR2A BACH1 IKZF2 ZIC2 LARP7 RAMP1 KLHL30 PER2 LRRFIP1 ESPNL UBE2F ILKAP ENSG00000263723 LOC105373960
GH02J237922 Enhancer 1.1 ENCODE dbSUPER 0.4 +10.9 10896 1.9 CC2D1A CTCF MNT MLLT1 GTF2F1 TFE3 TRIM24 PRDM1 RAD21 MTA1 UBE2F RAMP1 ILKAP RBM44 SCLY PER2 LOC105373960 ENSG00000263723
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373960 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373960 Gene

Genomic Locations for LOC105373960 Gene
chr2:237,922,333-237,934,197
(GRCh38/hg38)
Size:
11,865 bases
Orientation:
Minus strand

Genomic View for LOC105373960 Gene

Genes around LOC105373960 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373960 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373960 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373960 Gene

Proteins for LOC105373960 Gene

Post-translational modifications for LOC105373960 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373960 Gene

Domains & Families for LOC105373960 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373960 Gene

Function for LOC105373960 Gene

Phenotypes From GWAS Catalog for LOC105373960 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373960 Gene

Localization for LOC105373960 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373960 Gene

Pathways & Interactions for LOC105373960 Gene

PathCards logo

SuperPathways for LOC105373960 Gene

No Data Available

Interacting Proteins for LOC105373960 Gene

Gene Ontology (GO) - Biological Process for LOC105373960 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373960 Gene

Drugs & Compounds for LOC105373960 Gene

No Compound Related Data Available

Transcripts for LOC105373960 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373960 Gene

No ASD Table

Relevant External Links for LOC105373960 Gene

GeneLoc Exon Structure for
LOC105373960

No data available for mRNA/cDNA for LOC105373960 Gene

Expression for LOC105373960 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373960 Gene

Orthologs for LOC105373960 Gene

No data available for Orthologs and Evolution for LOC105373960 Gene

Paralogs for LOC105373960 Gene

No data available for Paralogs for LOC105373960 Gene

Variants for LOC105373960 Gene

Sequence variations from dbSNP and Humsavar for LOC105373960 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000551361 -- 237,928,701(-) C/T intron_variant
rs1000568523 -- 237,934,770(-) T/C upstream_transcript_variant
rs1000705548 -- 237,922,756(-) TGTTTG/TG intron_variant, non_coding_transcript_variant
rs1001079298 -- 237,930,991(-) T/C intron_variant
rs1001260858 -- 237,923,918(-) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373960 Gene

Disorders for LOC105373960 Gene

No disorders were found for LOC105373960 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373960 Gene

Publications for LOC105373960 Gene

No publications were found for LOC105373960 Gene.

No data available for External Links for LOC105373960 Gene

Products for LOC105373960 Gene

Sources for LOC105373960 Gene

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