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Aliases for LOC105373936 Gene

Subcategory (RNA class) for LOC105373936 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105373936 Gene

  • Uncharacterized LOC105373936 3

External Ids for LOC105373936 Gene

Previous GeneCards Identifiers for LOC105373936 Gene

  • GC02U903901

Summaries for LOC105373936 Gene

GeneCards Summary for LOC105373936 Gene

LOC105373936 (Uncharacterized LOC105373936) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373936 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373936 Gene

Genomics for LOC105373936 Gene

GeneHancer (GH) Regulatory Elements for LOC105373936 Gene

Promoters and enhancers for LOC105373936 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J234630 Enhancer 1 FANTOM5 ENCODE 600.7 +0.0 23 4.3 NCOA3 KAT8 CREB1 ARID3A TARDBP CTBP1 KAT7 RFX1 ZNF205 PKNOX1 LOC105373936 SH3BP4 ARL4C
GH02J234629 Enhancer 0.4 Ensembl 0.7 +3.4 3404 0.2 REST MIER2 LOC105373936 ARL4C
GH02J234620 Enhancer 0.5 Ensembl ENCODE 0.4 +12.6 12604 1.4 JUN LOC105373936 ARL4C
GH02J234594 Enhancer 0.7 Ensembl ENCODE 0.3 +36.3 36295 3.2 CREB1 ATF7 MAFK FOS ATF2 LOC105373936 ARL4C
GH02J234548 Enhancer 1.1 Ensembl ENCODE 0.2 +83.7 83701 4.4 CC2D1A ELF3 CTCF AHR TFE3 PRDM1 RAD21 CREB1 PRDM10 GATAD2A ARL4C LOC105373936
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373936 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373936 Gene

Genomic Locations for LOC105373936 Gene
chr2:234,596,554-234,632,705
(GRCh38/hg38)
Size:
36,152 bases
Orientation:
Minus strand

Genomic View for LOC105373936 Gene

Genes around LOC105373936 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373936 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373936 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373936 Gene

Proteins for LOC105373936 Gene

Post-translational modifications for LOC105373936 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373936 Gene

Domains & Families for LOC105373936 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373936 Gene

Function for LOC105373936 Gene

Phenotypes From GWAS Catalog for LOC105373936 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373936 Gene

Localization for LOC105373936 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373936 Gene

Pathways & Interactions for LOC105373936 Gene

PathCards logo

SuperPathways for LOC105373936 Gene

No Data Available

Interacting Proteins for LOC105373936 Gene

Gene Ontology (GO) - Biological Process for LOC105373936 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373936 Gene

Drugs & Compounds for LOC105373936 Gene

No Compound Related Data Available

Transcripts for LOC105373936 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373936 Gene

No ASD Table

Relevant External Links for LOC105373936 Gene

GeneLoc Exon Structure for
LOC105373936

No data available for mRNA/cDNA for LOC105373936 Gene

Expression for LOC105373936 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373936 Gene

Orthologs for LOC105373936 Gene

No data available for Orthologs and Evolution for LOC105373936 Gene

Paralogs for LOC105373936 Gene

No data available for Paralogs for LOC105373936 Gene

Variants for LOC105373936 Gene

Sequence variations from dbSNP and Humsavar for LOC105373936 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000037663 -- 234,627,924(-) C/A/T intron_variant
rs1000103650 -- 234,597,477(-) T/A non_coding_transcript_variant
rs1000167166 -- 234,633,584(-) G/A upstream_transcript_variant
rs1000262197 -- 234,629,360(-) C/T intron_variant
rs1000274598 -- 234,603,155(-) C/A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373936 Gene

Disorders for LOC105373936 Gene

No disorders were found for LOC105373936 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373936 Gene

Publications for LOC105373936 Gene

No publications were found for LOC105373936 Gene.

No data available for External Links for LOC105373936 Gene

Products for LOC105373936 Gene

Sources for LOC105373936 Gene

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