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Aliases for LOC105373907 Gene

Subcategory (RNA class) for LOC105373907 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105373907 Gene

  • Uncharacterized LOC105373907 3

External Ids for LOC105373907 Gene

Previous GeneCards Identifiers for LOC105373907 Gene

  • GC02U903898

Summaries for LOC105373907 Gene

GeneCards Summary for LOC105373907 Gene

LOC105373907 (Uncharacterized LOC105373907) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373907 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373907 Gene

Genomics for LOC105373907 Gene

GeneHancer (GH) Regulatory Elements for LOC105373907 Gene

Promoters and enhancers for LOC105373907 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J223469 Enhancer 1 Ensembl ENCODE 0.4 -19.6 -19614 1.5 ZBTB21 INSM2 EBF1 GLI4 ZEB1 HIC1 ZNF324 GLIS2 ZNF366 PRDM10 LOC105373907 HIGD1AP4
GH02J223465 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 -23.1 -23112 1.2 FOXA2 JUN MAX CEBPG ZIC2 RAD21 RFX5 YY1 EGR1 POLR2A WDFY1 LOC105373907 HIGD1AP4
GH02J223460 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.3 -27.9 -27949 1.6 RFX1 JUN CEBPB EP300 SP1 JUND POLR2A STAT3 FOSL2 FOS WDFY1 LOC105373907 HIGD1AP4
GH02J223468 Enhancer 0.4 FANTOM5 0.3 -20.6 -20562 0.2 PKNOX1 WDFY1 LOC105373907 HIGD1AP4
GH02J223467 Enhancer 0.3 FANTOM5 0.3 -21.6 -21640 0.3 WDFY1 LOC105373907 HIGD1AP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105373907 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373907 Gene

Genomic Locations for LOC105373907 Gene
chr2:223,489,113-223,506,153
(GRCh38/hg38)
Size:
17,041 bases
Orientation:
Plus strand

Genomic View for LOC105373907 Gene

Genes around LOC105373907 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373907 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373907 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373907 Gene

Proteins for LOC105373907 Gene

Post-translational modifications for LOC105373907 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373907 Gene

Domains & Families for LOC105373907 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373907 Gene

Function for LOC105373907 Gene

Phenotypes From GWAS Catalog for LOC105373907 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373907 Gene

Localization for LOC105373907 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373907 Gene

Pathways & Interactions for LOC105373907 Gene

SuperPathways for LOC105373907 Gene

No Data Available

Interacting Proteins for LOC105373907 Gene

Gene Ontology (GO) - Biological Process for LOC105373907 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373907 Gene

Drugs & Compounds for LOC105373907 Gene

No Compound Related Data Available

Transcripts for LOC105373907 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373907 Gene

No ASD Table

Relevant External Links for LOC105373907 Gene

GeneLoc Exon Structure for
LOC105373907

No data available for mRNA/cDNA for LOC105373907 Gene

Expression for LOC105373907 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373907 Gene

Orthologs for LOC105373907 Gene

No data available for Orthologs and Evolution for LOC105373907 Gene

Paralogs for LOC105373907 Gene

No data available for Paralogs for LOC105373907 Gene

Variants for LOC105373907 Gene

Sequence variations from dbSNP and Humsavar for LOC105373907 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000012833 -- 223,488,485(+) T/G upstream_transcript_variant
rs1000066906 -- 223,499,499(+) G/T intron_variant
rs1000167081 -- 223,496,542(+) G/C intron_variant
rs1000324843 -- 223,491,041(+) T/C intron_variant
rs1000373915 -- 223,501,493(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373907 Gene

Disorders for LOC105373907 Gene

No disorders were found for LOC105373907 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373907 Gene

Publications for LOC105373907 Gene

No publications were found for LOC105373907 Gene.

Products for LOC105373907 Gene

Sources for LOC105373907 Gene

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