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Aliases for LOC105373885 Gene

Subcategory (RNA class) for LOC105373885 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105373885 Gene

  • Uncharacterized LOC105373885 3

External Ids for LOC105373885 Gene

Previous GeneCards Identifiers for LOC105373885 Gene

  • GC02U903793

Summaries for LOC105373885 Gene

GeneCards Summary for LOC105373885 Gene

LOC105373885 (Uncharacterized LOC105373885) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373885 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373885 Gene

Genomics for LOC105373885 Gene

GeneHancer (GH) Regulatory Elements for LOC105373885 Gene

Promoters and enhancers for LOC105373885 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I219520 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -5.0 -4977 3.5 HDGF PKNOX1 ATF1 ARNT ETS1 GTF3C2 TCF12 ZNF766 GLIS2 GATA2 ASIC4 TMEM198 ENSG00000269068 LOC105373885
GH02I219514 Promoter/Enhancer 1.5 EPDnew ENCODE 0.8 +2.6 2605 0.2 PKNOX1 ATF1 ARNT TCF12 GATA2 ATF7 NCOA1 REST ZNF592 MEF2D ASIC4 ZFAND2B ANKZF1 ENSG00000227432 LOC105373885
GH02I219495 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 +19.0 19021 5 HDGF PKNOX1 SMAD1 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 ENSG00000268603 GC02M219493 GMPPA ZNF142 STK36 RNF25 CNOT9 USP37 NHEJ1 STK11IP
GH02I219509 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +7.0 7038 1.6 HDGF PKNOX1 SMAD1 ARNT SIN3A ZNF2 ZNF766 CBX5 E2F8 ZNF143 ASIC4 ENSG00000227432 LOC105373885 GMPPA
GH02I219529 Enhancer 1.1 Ensembl ENCODE 0.4 -13.2 -13227 0.7 ELF3 RB1 ARNT ARID4B KLF17 SIN3A ZNF2 ZNF48 RAD21 GLIS2 TMEM198 LOC105373885 ASIC4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105373885 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373885 Gene

Genomic Locations for LOC105373885 Gene
chr2:219,481,732-219,517,047
(GRCh38/hg38)
Size:
35,316 bases
Orientation:
Minus strand

Genomic View for LOC105373885 Gene

Genes around LOC105373885 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373885 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373885 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373885 Gene

Proteins for LOC105373885 Gene

Post-translational modifications for LOC105373885 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373885 Gene

Domains & Families for LOC105373885 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373885 Gene

Function for LOC105373885 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373885 Gene

Localization for LOC105373885 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373885 Gene

Pathways & Interactions for LOC105373885 Gene

SuperPathways for LOC105373885 Gene

No Data Available

Interacting Proteins for LOC105373885 Gene

Gene Ontology (GO) - Biological Process for LOC105373885 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373885 Gene

Drugs & Compounds for LOC105373885 Gene

No Compound Related Data Available

Transcripts for LOC105373885 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373885 Gene

No ASD Table

Relevant External Links for LOC105373885 Gene

GeneLoc Exon Structure for
LOC105373885

No data available for mRNA/cDNA for LOC105373885 Gene

Expression for LOC105373885 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373885 Gene

Orthologs for LOC105373885 Gene

No data available for Orthologs and Evolution for LOC105373885 Gene

Paralogs for LOC105373885 Gene

No data available for Paralogs for LOC105373885 Gene

Variants for LOC105373885 Gene

Sequence variations from dbSNP and Humsavar for LOC105373885 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs397518460 pathogenic, Alacrima, achalasia, and mental retardation syndrome 219,501,903(-) C/T intron_variant
rs397518461 pathogenic, Alacrima, achalasia, and mental retardation syndrome 219,506,260(-) A/C intron_variant
rs397518462 pathogenic, Alacrima, achalasia, and mental retardation syndrome 219,504,138(-) G/A intron_variant
rs587777672 pathogenic, Myopathy, centronuclear, 5 219,484,160(-) C/A/G/T intron_variant
rs587777676 pathogenic, Myopathy, centronuclear, 5 219,489,174(-) G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373885 Gene

Disorders for LOC105373885 Gene

No disorders were found for LOC105373885 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373885 Gene

Publications for LOC105373885 Gene

No publications were found for LOC105373885 Gene.

Products for LOC105373885 Gene

Sources for LOC105373885 Gene

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