Aliases for LOC105373881 Gene

Data sources for LOC105373881 Gene:

RNA type for LOC105373881 Gene

ncRNA

Aliases for LOC105373881 Gene

External Ids for LOC105373881 Gene

Previous GeneCards Identifiers for LOC105373881 Gene

  • GC02U903396

Summaries for LOC105373881 Gene

GeneCards Summary for LOC105373881 Gene

LOC105373881 (Uncharacterized LOC105373881) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373881 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373881 Gene

Genomics for LOC105373881 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105373881 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J218321 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 -1.9 -1903 4.1 MYC NCOR1 IKZF1 ZNF600 CEBPA ATF3 BRCA1 POLR2A NFIC ZIC2 PNKD LOC105373881 ENSG00000261338 SLC11A1 CNOT9 USP37 TMBIM1 GPBAR1 ARPC2 CYP27A1
GH02J218314 Enhancer 1 ENCODE dbSUPER 0.4 +5.3 5318 4 SSRP1 ZNF592 MXD4 ZNF513 GABPA FOXA2 CTBP1 MAFF SAP130 RARA LOC105373880 lnc-CATIP-4 ENSG00000261338 PNKD CNOT9 ANKZF1 STK36 AAMP RNF25 ZNF142
GH02J218309 Enhancer 1 FANTOM5 ENCODE 0.4 +10.3 10293 3.7 IKZF1 CEBPA ATF3 ZFP64 HOMEZ ZNF217 FOXA2 CTBP1 RXRA SAP130 ENSG00000261338 PNKD AAMP SLC11A1 CATIP-AS1 LOC105373880 lnc-GPBAR1-2 LOC105373881 TMBIM1 CATIP
GH02J218326 Promoter/Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -5.9 -5899 1.5 KLF9 PRDM10 ZNF24 SNODB1104 ENSG00000261338 LOC105373881 CATIP CATIP-AS2 TMBIM1 PNKD
GH02J218313 Promoter 0.6 Ensembl 0.4 +8.1 8137 0.2 CEBPA FOXA1 CEBPG PNKD LOC105373880 LOC105373881 lnc-GPBAR1-2 TMBIM1 CATIP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373881 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105373881 Gene

Latest Assembly
chr2:218,305,547-218,322,038
(GRCh38/hg38)
Size:
16,492 bases
Orientation:
Minus strand

Genomic View for LOC105373881 Gene

Genes around LOC105373881 on UCSC Golden Path with GeneCards custom track
LOC105373881 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105373881 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373881 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373881 Gene

Proteins for LOC105373881 Gene

Post-translational modifications for LOC105373881 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373881 Gene

Domains & Families for LOC105373881 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373881 Gene

Function for LOC105373881 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373881 Gene

Localization for LOC105373881 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373881 Gene

Pathways & Interactions for LOC105373881 Gene

PathCards logo

SuperPathways for LOC105373881 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373881 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373881 Gene

Drugs & Compounds for LOC105373881 Gene

No Compound Related Data Available

Transcripts for LOC105373881 Gene

LOC105373881 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373881 Gene

No ASD Table

Relevant External Links for LOC105373881 Gene

GeneLoc Exon Structure for
LOC105373881

No data available for mRNA/cDNA for LOC105373881 Gene

Expression for LOC105373881 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373881 Gene

Orthologs for LOC105373881 Gene

No data available for Orthologs and Evolution for LOC105373881 Gene

Paralogs for LOC105373881 Gene

No data available for Paralogs for LOC105373881 Gene

Variants for LOC105373881 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105373881 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373881 Gene

Disorders for LOC105373881 Gene

No disorders were found for LOC105373881 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373881 Gene

Publications for LOC105373881 Gene

No publications were found for LOC105373881 Gene.

No data available for Mastermind for LOC105373881 Gene

Products for LOC105373881 Gene

Sources for LOC105373881 Gene