Aliases for LOC105373880 Gene

Subcategory (RNA class) for LOC105373880 Gene

ncRNA

Aliases for LOC105373880 Gene

  • Uncharacterized LOC105373880 3

External Ids for LOC105373880 Gene

Previous GeneCards Identifiers for LOC105373880 Gene

  • GC02U903114

Summaries for LOC105373880 Gene

GeneCards Summary for LOC105373880 Gene

LOC105373880 (Uncharacterized LOC105373880) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373880 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373880 Gene

Genomics for LOC105373880 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105373880 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J218314 Enhancer 1 ENCODE dbSUPER 600.7 +0.2 197 4 CREB1 GATAD2A TFE3 ZNF512 ZNF24 GABPA CEBPB CTBP1 NFE2 HDGF LOC105373880 lnc-CATIP-4 ENSG00000261338 PNKD CNOT9 ANKZF1 STK36 AAMP RNF25 ZNF142
GH02J218309 Enhancer 1 FANTOM5 ENCODE 0.7 -4.8 -4778 3.7 GATAD2A IKZF1 RCOR2 FOXA1 RXRB SP1 CEBPA SCRT2 SOX13 CTBP1 ENSG00000261338 PNKD AAMP ZNF142 SLC11A1 CATIP-AS1 LOC105373880 lnc-GPBAR1-2 LOC105373881 TMBIM1
GH02J218313 Promoter 0.6 Ensembl 0.7 -2.6 -2622 0.2 CEBPA FOXA1 CEBPG PNKD LOC105373880 LOC105373881 lnc-GPBAR1-2 TMBIM1 CATIP
GH02J218308 Enhancer 0.5 FANTOM5 0.4 -8.4 -8399 0.2 PKNOX1 SOX6 SOX13 CTBP1 NR2F1 MEIS2 ESRRA ENSG00000261338 AAMP PNKD lnc-GPBAR1-2 LOC105373880 LOC105373881 TMBIM1 CATIP
GH02J218305 Enhancer 0.3 Ensembl 0.4 -10.6 -10622 0.2 ZNF121 ENSG00000261338 SLC11A1 CTDSP1 MIR26B AAMP PNKD lnc-GPBAR1-2 LOC105373880 TMBIM1 LOC105373881
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373880 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105373880 Gene

Genomic Locations for LOC105373880 Gene
chr2:218,316,523-218,318,603
(GRCh38/hg38)
Size:
2,081 bases
Orientation:
Plus strand

Genomic View for LOC105373880 Gene

Genes around LOC105373880 on UCSC Golden Path with GeneCards custom track
LOC105373880 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105373880 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373880 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373880 Gene

Proteins for LOC105373880 Gene

Post-translational modifications for LOC105373880 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373880 Gene

Domains & Families for LOC105373880 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373880 Gene

Function for LOC105373880 Gene

Phenotypes From GWAS Catalog for LOC105373880 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373880 Gene

Localization for LOC105373880 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373880 Gene

Pathways & Interactions for LOC105373880 Gene

PathCards logo

SuperPathways for LOC105373880 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373880 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373880 Gene

Drugs & Compounds for LOC105373880 Gene

No Compound Related Data Available

Transcripts for LOC105373880 Gene

LOC105373880 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373880 Gene

No ASD Table

Relevant External Links for LOC105373880 Gene

GeneLoc Exon Structure for
LOC105373880

No data available for mRNA/cDNA for LOC105373880 Gene

Expression for LOC105373880 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373880 Gene

Orthologs for LOC105373880 Gene

No data available for Orthologs and Evolution for LOC105373880 Gene

Paralogs for LOC105373880 Gene

No data available for Paralogs for LOC105373880 Gene

Variants for LOC105373880 Gene

Additional dbSNP identifiers (rs#s) for LOC105373880 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373880 Gene

Disorders for LOC105373880 Gene

No disorders were found for LOC105373880 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373880 Gene

Publications for LOC105373880 Gene

No publications were found for LOC105373880 Gene.

No data available for Mastermind for LOC105373880 Gene

Products for LOC105373880 Gene

Sources for LOC105373880 Gene