Aliases for LOC105373876 Gene

Data sources for LOC105373876 Gene:

RNA type for LOC105373876 Gene

lncRNA

Aliases for LOC105373876 Gene

External Ids for LOC105373876 Gene

Previous GeneCards Identifiers for LOC105373876 Gene

  • GC02U903325

Summaries for LOC105373876 Gene

GeneCards Summary for LOC105373876 Gene

LOC105373876 (Uncharacterized LOC105373876) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105373876 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373876 Gene

Genomics for LOC105373876 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105373876 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373876 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105373876 Gene

Latest Assembly
chr2:216,866,318-216,867,814
(GRCh38/hg38)
Size:
1,497 bases
Orientation:
Minus strand

Previous Assembly
chr2:217,731,055-217,732,532
(GRCh37/hg19 by Entrez Gene)
Size:
1,478 bases
Orientation:
Minus strand

chr2:217,731,055-217,732,536
(GRCh37/hg19 by Ensembl)
Size:
1,482 bases
Orientation:
Minus strand

Genomic View for LOC105373876 Gene

Genes around LOC105373876 on UCSC Golden Path with GeneCards custom track
LOC105373876 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105373876 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373876 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373876 Gene

Proteins for LOC105373876 Gene

Post-translational modifications for LOC105373876 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373876 Gene

Domains & Families for LOC105373876 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373876 Gene

Function for LOC105373876 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373876 Gene

Localization for LOC105373876 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373876 Gene

Pathways & Interactions for LOC105373876 Gene

PathCards logo

SuperPathways for LOC105373876 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373876 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373876 Gene

Drugs & Compounds for LOC105373876 Gene

No Compound Related Data Available

Transcripts for LOC105373876 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105373876 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000225F8A_9606 lncRNA 432 4

Ensembl: ENST00000421907 (view in UCSC) ,

LncBook: HSALNT0047057,

LNCipedia: lnc-TNP1-3:2,

NONCODE: NONHSAT076841.2,

URS0000A76E75_9606 lncRNA 426 1

RefSeq: NR_135525,

URS00009B9108_9606 lncRNA 446 2

LncBook: HSALNT0047056,

NONCODE: NONHSAT186294.1,

URS00009BE15A_9606 lncRNA 430 2

LncBook: HSALNT0047058,

NONCODE: NONHSAT186295.1,

URS0001BCD806_9606 lncRNA 446 1

LncBook: HSALNT0047056,

LOC105373876 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC105373876 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373876 Gene

No ASD Table

Relevant External Links for LOC105373876 Gene

GeneLoc Exon Structure for
LOC105373876

Expression for LOC105373876 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105373876

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373876 Gene

Orthologs for LOC105373876 Gene

Evolution for LOC105373876 Gene

ENSEMBL:
Gene Tree for LOC105373876 (if available)
TreeFam:
Gene Tree for LOC105373876 (if available)

No data available for Orthologs for LOC105373876 Gene

Paralogs for LOC105373876 Gene

No data available for Paralogs for LOC105373876 Gene

Variants for LOC105373876 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105373876 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373876 Gene

Disorders for LOC105373876 Gene

No disorders were found for LOC105373876 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373876 Gene

Publications for LOC105373876 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LOC105373876 Gene

Products for LOC105373876 Gene

Sources for LOC105373876 Gene