Aliases for LOC105373627 Gene

Data sources for LOC105373627 Gene:

Subcategory (RNA class) for LOC105373627 Gene

ncRNA

Aliases for LOC105373627 Gene

External Ids for LOC105373627 Gene

Previous GeneCards Identifiers for LOC105373627 Gene

  • GC02U903776

Summaries for LOC105373627 Gene

GeneCards Summary for LOC105373627 Gene

LOC105373627 (Uncharacterized LOC105373627) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373627 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373627 Gene

Genomics for LOC105373627 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105373627 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J133985 Enhancer 0.8 Ensembl ENCODE 250.7 -0.4 -410 1.7 CEBPB FOSL1 CEBPG TEAD4 ATF2 ATF4 ZNF366 ZXDB ZNF629 ATF3 LOC105373627 LOC105373628 ENSG00000286697 lnc-TMEM163-6 MGAT5 NCKAP5
GH02J133951 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +34.1 34059 4.6 IRF4 EBF1 BHLHE40 BATF ZNF24 IKZF1 ATF2 TCF12 ARID3A ATF7 LOC105373627 HSALNG0019009 lnc-TMEM163-6 MGAT5 NCKAP5
GH02J134020 Enhancer 0.7 Ensembl 0.3 -35.1 -35094 2.5 BCL11A IRF4 EBF1 BATF ELF1 TCF7 MTA3 JUNB ATF7 SPI1 ENSG00000286697 lnc-TMEM163-6 LOC105373628 LOC105373627 MGAT5 NCKAP5
GH02J133976 Enhancer 0.3 Ensembl 0.4 +9.8 9808 2.7 POLR2A LOC105373627 lnc-TMEM163-6 HSALNG0019009 MGAT5 NCKAP5
GH02J133981 Enhancer 0.2 ENCODE 0.7 +3.7 3749 0.9 LOC105373627 lnc-TMEM163-6 HSALNG0019009 MGAT5 NCKAP5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373627 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105373627 Gene

Latest Assembly
chr2:133,927,076-133,986,160
(GRCh38/hg38)
Size:
59,085 bases
Orientation:
Minus strand

Genomic View for LOC105373627 Gene

Genes around LOC105373627 on UCSC Golden Path with GeneCards custom track
LOC105373627 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105373627 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373627 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373627 Gene

Proteins for LOC105373627 Gene

Post-translational modifications for LOC105373627 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373627 Gene

Domains & Families for LOC105373627 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373627 Gene

Function for LOC105373627 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373627 Gene

Localization for LOC105373627 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373627 Gene

Pathways & Interactions for LOC105373627 Gene

PathCards logo

SuperPathways for LOC105373627 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373627 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373627 Gene

Drugs & Compounds for LOC105373627 Gene

No Compound Related Data Available

Transcripts for LOC105373627 Gene

LOC105373627 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373627 Gene

No ASD Table

Relevant External Links for LOC105373627 Gene

GeneLoc Exon Structure for
LOC105373627

No data available for mRNA/cDNA for LOC105373627 Gene

Expression for LOC105373627 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373627 Gene

Orthologs for LOC105373627 Gene

No data available for Orthologs and Evolution for LOC105373627 Gene

Paralogs for LOC105373627 Gene

No data available for Paralogs for LOC105373627 Gene

Variants for LOC105373627 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105373627 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373627 Gene

Disorders for LOC105373627 Gene

No disorders were found for LOC105373627 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373627 Gene

Publications for LOC105373627 Gene

No publications were found for LOC105373627 Gene.

No data available for Mastermind for LOC105373627 Gene

Products for LOC105373627 Gene

Sources for LOC105373627 Gene