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Aliases for LOC105373627 Gene
Data sources for LOC105373627 Gene:
Subcategory (RNA class) for LOC105373627 Gene
ncRNA
Aliases for LOC105373627 Gene
- Uncharacterized LOC105373627 (NCBI Entrez Gene)
External Ids for LOC105373627 Gene
- NCBI Entrez Gene: 105373627
Previous GeneCards Identifiers for LOC105373627 Gene
- GC02U903776
Summaries for LOC105373627 Gene
GeneCards Summary for LOC105373627 Gene
LOC105373627 (Uncharacterized LOC105373627) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105373627 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373627 Gene
Genomics for LOC105373627 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC105373627 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH02J133985 | Enhancer | 0.8 | Ensembl ENCODE | 250.7 | -0.4 | -410 | 1.7 | CEBPB FOSL1 CEBPG TEAD4 ATF2 ATF4 ZNF366 ZXDB ZNF629 ATF3 | LOC105373627 LOC105373628 ENSG00000286697 lnc-TMEM163-6 MGAT5 NCKAP5 | |
| GH02J133951 | Enhancer | 1 | Ensembl ENCODE dbSUPER | 0.3 | +34.1 | 34059 | 4.6 | IRF4 EBF1 BHLHE40 BATF ZNF24 IKZF1 ATF2 TCF12 ARID3A ATF7 | LOC105373627 HSALNG0019009 lnc-TMEM163-6 MGAT5 NCKAP5 | |
| GH02J134020 | Enhancer | 0.7 | Ensembl | 0.3 | -35.1 | -35094 | 2.5 | BCL11A IRF4 EBF1 BATF ELF1 TCF7 MTA3 JUNB ATF7 SPI1 | ENSG00000286697 lnc-TMEM163-6 LOC105373628 LOC105373627 MGAT5 NCKAP5 | |
| GH02J133976 | Enhancer | 0.3 | Ensembl | 0.4 | +9.8 | 9808 | 2.7 | POLR2A | LOC105373627 lnc-TMEM163-6 HSALNG0019009 MGAT5 NCKAP5 | |
| GH02J133981 | Enhancer | 0.2 | ENCODE | 0.7 | +3.7 | 3749 | 0.9 | LOC105373627 lnc-TMEM163-6 HSALNG0019009 MGAT5 NCKAP5 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105373627 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC105373627 Gene
Latest Assembly
- chr2:133,927,076-133,986,160
- (GRCh38/hg38)
- Size:
- 59,085 bases
- Orientation:
- Minus strand
Genomic View for LOC105373627 Gene
Genes around LOC105373627 on UCSC Golden Path with GeneCards custom track
LOC105373627 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 2q21.2 by Entrez Gene
LOC105373627 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105373627 Gene
Proteins for LOC105373627 Gene
Post-translational modifications for LOC105373627 Gene
No Post-translational modifications
No data available for DME Specific Peptides for LOC105373627 Gene
Domains & Families for LOC105373627 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373627 Gene
Function for LOC105373627 Gene
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373627 Gene
Localization for LOC105373627 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373627 Gene
Transcripts for LOC105373627 Gene
LOC105373627 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for LOC105373627 Gene
- GeneLoc Exon Structure for
- LOC105373627
No data available for mRNA/cDNA for LOC105373627 Gene
Expression for LOC105373627 Gene
No Expression Related Data Available
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373627 Gene
Orthologs for LOC105373627 Gene
No data available for Orthologs and Evolution for LOC105373627 Gene
Paralogs for LOC105373627 Gene
No data available for Paralogs for LOC105373627 Gene
Variants for LOC105373627 Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373627 Gene
Disorders for LOC105373627 Gene
No disorders were found for LOC105373627 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373627 Gene
Publications for LOC105373627 Gene
No publications were found for LOC105373627 Gene.
No data available for Mastermind for LOC105373627 Gene
Products for LOC105373627 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105373627
- Origene Custom Protein Services for LOC105373627
- Browse OriGene Inhibitory RNA Products For LOC105373627
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC105373627
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC105373627
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC105373627
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC105373627
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC105373627
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC105373627
Sources for LOC105373627 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB