Aliases for LOC105373525 Gene

Subcategory (RNA class) for LOC105373525 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC105373525 Gene

  • Uncharacterized LOC105373525 3
  • Novel Transcript 5
  • HSALNG0017524 167
  • NONHSAG028800 92
  • Lnc-POU3F3-3 168
  • AC013402.3 5

External Ids for LOC105373525 Gene

Previous GeneCards Identifiers for LOC105373525 Gene

  • GC02U903738

Summaries for LOC105373525 Gene

GeneCards Summary for LOC105373525 Gene

LOC105373525 (Uncharacterized LOC105373525) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105373525 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373525 Gene

Genomics for LOC105373525 Gene

GeneHancer (GH) Regulatory Elements for LOC105373525 Gene

Promoters and enhancers for LOC105373525 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J104582 Enhancer 0.7 UCNEbase Ensembl 500.7 +0.2 163 3.4 PKNOX1 ZNF143 ENSG00000231626 LOC105373524 LOC105373525 piR-61614-063
GH02J104599 Enhancer 0.6 Ensembl ENCODE 0.4 +17.0 16993 1.4 FOS CEBPB ZNF37A MYC STAT3 ENSG00000272994 piR-39341-196 piR-61614-063 LOC105373525
GH02J104620 Enhancer 0.4 Ensembl 0.3 +37.9 37863 0.8 CREB1 ZNF263 SPI1 RF00017-3290 lnc-TGFBRAP1-17 LOC105373525
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373525 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373525 Gene

Genomic Locations for LOC105373525 Gene
chr2:104,583,138-104,621,767
(GRCh38/hg38)
Size:
38,630 bases
Orientation:
Plus strand
chr2:105,199,610-105,201,812
(GRCh37/hg19)
Size:
2,203 bases
Orientation:
Plus strand

Genomic View for LOC105373525 Gene

Genes around LOC105373525 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373525 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373525 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373525 Gene

Proteins for LOC105373525 Gene

Post-translational modifications for LOC105373525 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373525 Gene

Domains & Families for LOC105373525 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373525 Gene

Function for LOC105373525 Gene

Phenotypes From GWAS Catalog for LOC105373525 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373525 Gene

Localization for LOC105373525 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373525 Gene

Pathways & Interactions for LOC105373525 Gene

PathCards logo

SuperPathways for LOC105373525 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105373525 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373525 Gene

Drugs & Compounds for LOC105373525 Gene

No Compound Related Data Available

Transcripts for LOC105373525 Gene

mRNA/cDNA for LOC105373525 Gene

4 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
3 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373525 Gene

No ASD Table

Relevant External Links for LOC105373525 Gene

GeneLoc Exon Structure for
LOC105373525

Expression for LOC105373525 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373525 Gene

Orthologs for LOC105373525 Gene

Evolution for LOC105373525 Gene

ENSEMBL:
Gene Tree for LOC105373525 (if available)
TreeFam:
Gene Tree for LOC105373525 (if available)

No data available for Orthologs for LOC105373525 Gene

Paralogs for LOC105373525 Gene

No data available for Paralogs for LOC105373525 Gene

Variants for LOC105373525 Gene

Additional dbSNP identifiers (rs#s) for LOC105373525 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373525 Gene

Disorders for LOC105373525 Gene

No disorders were found for LOC105373525 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373525 Gene

Publications for LOC105373525 Gene

No publications were found for LOC105373525 Gene.

No data available for Mastermind for LOC105373525 Gene

Products for LOC105373525 Gene

Sources for LOC105373525 Gene