Aliases for LOC105373525 Gene

Data sources for LOC105373525 Gene:

Subcategory (RNA class) for LOC105373525 Gene

lncRNA

Aliases for LOC105373525 Gene

External Ids for LOC105373525 Gene

Previous GeneCards Identifiers for LOC105373525 Gene

  • GC02U903738

Summaries for LOC105373525 Gene

GeneCards Summary for LOC105373525 Gene

LOC105373525 (Uncharacterized LOC105373525) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105373525 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373525 Gene

Genomics for LOC105373525 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105373525 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J104582 Enhancer 0.6 UCNEbase Ensembl 250.7 -0.6 -623 1.8 ZNF143 ENSG00000231626 HSALNG0017524 LOC105373524 LOC105373525 HSALNG0017521 POU3F3
GH02J104583 Enhancer 0.3 Ensembl 250.7 +1.2 1177 1.4 PKNOX1 HSALNG0017524 LOC105373525 piR-61614-063 HSALNG0017521 POU3F3
GH02J104599 Enhancer 0.6 Ensembl ENCODE 0.4 +17.0 17007 1.4 CEBPB FOS ZNF37A C2orf49-DT piR-39341-196 piR-61614-063 LOC105373525 HSALNG0017521 POU3F3
GH02J104620 Enhancer 0.3 Ensembl 0.3 +37.9 37877 0.8 SPI1 CREB1 RF00017-3290 HSALNG0017526 HSALNG0017521 LOC105373525 POU3F3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373525 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105373525 Gene

Latest Assembly
chr2:104,583,124-104,621,767
(GRCh38/hg38)
Size:
38,644 bases
Orientation:
Plus strand

Previous Assembly
chr2:105,199,610-105,201,812
(GRCh37/hg19 by Ensembl)
Size:
2,203 bases
Orientation:
Plus strand

Genomic View for LOC105373525 Gene

Genes around LOC105373525 on UCSC Golden Path with GeneCards custom track
LOC105373525 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105373525 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373525 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373525 Gene

Proteins for LOC105373525 Gene

Post-translational modifications for LOC105373525 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373525 Gene

Domains & Families for LOC105373525 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373525 Gene

Function for LOC105373525 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373525 Gene

Localization for LOC105373525 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373525 Gene

Pathways & Interactions for LOC105373525 Gene

PathCards logo

SuperPathways for LOC105373525 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373525 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373525 Gene

Drugs & Compounds for LOC105373525 Gene

No Compound Related Data Available

Transcripts for LOC105373525 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105373525 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000059D9EF_9606 lncRNA 453 4

Ensembl: ENST00000438566 (view in UCSC) ,

LncBook: HSALNT0036942,

LNCipedia: lnc-POU3F3-3:1,

NONCODE: NONHSAT072932.2,

URS0000EF3CF4_9606 lncRNA 1777 1

Ensembl: ENST00000659877 (view in UCSC) ,

URS00009BA298_9606 lncRNA 451 2

LncBook: HSALNT0036943,

NONCODE: NONHSAT182315.1,

URS0000EC072A_9606 lncRNA 1012 1

LncBook: HSALNT0036944,

LOC105373525 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373525 Gene

No ASD Table

Relevant External Links for LOC105373525 Gene

GeneLoc Exon Structure for
LOC105373525

No data available for mRNA/cDNA for LOC105373525 Gene

Expression for LOC105373525 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373525 Gene

Orthologs for LOC105373525 Gene

Evolution for LOC105373525 Gene

ENSEMBL:
Gene Tree for LOC105373525 (if available)
TreeFam:
Gene Tree for LOC105373525 (if available)

No data available for Orthologs for LOC105373525 Gene

Paralogs for LOC105373525 Gene

No data available for Paralogs for LOC105373525 Gene

Variants for LOC105373525 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105373525 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373525 Gene

Disorders for LOC105373525 Gene

No disorders were found for LOC105373525 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373525 Gene

Publications for LOC105373525 Gene

No publications were found for LOC105373525 Gene.

No data available for Mastermind for LOC105373525 Gene

Products for LOC105373525 Gene

Sources for LOC105373525 Gene