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Aliases for LOC105373525 Gene
Data sources for LOC105373525 Gene:
Subcategory (RNA class) for LOC105373525 Gene
lncRNA
Aliases for LOC105373525 Gene
External Ids for LOC105373525 Gene
- NCBI Entrez Gene: 105373525
- Ensembl: ENSG00000236109
Previous GeneCards Identifiers for LOC105373525 Gene
- GC02U903738
Summaries for LOC105373525 Gene
GeneCards Summary for LOC105373525 Gene
LOC105373525 (Uncharacterized LOC105373525) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LOC105373525 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373525 Gene
Genomics for LOC105373525 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC105373525 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH02J104582 | Enhancer | 0.6 | UCNEbase Ensembl | 250.7 | -0.6 | -623 | 1.8 | ZNF143 | ENSG00000231626 HSALNG0017524 LOC105373524 LOC105373525 HSALNG0017521 POU3F3 | |
| GH02J104583 | Enhancer | 0.3 | Ensembl | 250.7 | +1.2 | 1177 | 1.4 | PKNOX1 | HSALNG0017524 LOC105373525 piR-61614-063 HSALNG0017521 POU3F3 | |
| GH02J104599 | Enhancer | 0.6 | Ensembl ENCODE | 0.4 | +17.0 | 17007 | 1.4 | CEBPB FOS ZNF37A | C2orf49-DT piR-39341-196 piR-61614-063 LOC105373525 HSALNG0017521 POU3F3 | |
| GH02J104620 | Enhancer | 0.3 | Ensembl | 0.3 | +37.9 | 37877 | 0.8 | SPI1 CREB1 | RF00017-3290 HSALNG0017526 HSALNG0017521 LOC105373525 POU3F3 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105373525 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC105373525 Gene
Latest Assembly
- chr2:104,583,124-104,621,767
- (GRCh38/hg38)
- Size:
- 38,644 bases
- Orientation:
- Plus strand
Previous Assembly
- chr2:105,199,610-105,201,812
- (GRCh37/hg19 by Ensembl)
- Size:
- 2,203 bases
- Orientation:
- Plus strand
Genomic View for LOC105373525 Gene
Genes around LOC105373525 on UCSC Golden Path with GeneCards custom track
LOC105373525 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 2q12.1 by Entrez Gene
- 2q12.1 by Ensembl
LOC105373525 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105373525 Gene
Proteins for LOC105373525 Gene
Post-translational modifications for LOC105373525 Gene
No Post-translational modifications
No data available for DME Specific Peptides for LOC105373525 Gene
Domains & Families for LOC105373525 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373525 Gene
Function for LOC105373525 Gene
Phenotypes From GWAS Catalog for LOC105373525 Gene
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373525 Gene
Localization for LOC105373525 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373525 Gene
Transcripts for LOC105373525 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105373525 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS000059D9EF_9606 | lncRNA | 453 | 4 |
Ensembl: ENST00000438566 (view in UCSC) , LncBook: HSALNT0036942, LNCipedia: lnc-POU3F3-3:1, NONCODE: NONHSAT072932.2, |
| URS0000EF3CF4_9606 | lncRNA | 1777 | 1 |
Ensembl: ENST00000659877 (view in UCSC) , |
| URS00009BA298_9606 | lncRNA | 451 | 2 |
LncBook: HSALNT0036943, NONCODE: NONHSAT182315.1, |
| URS0000EC072A_9606 | lncRNA | 1012 | 1 |
LncBook: HSALNT0036944, |
LOC105373525 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for LOC105373525 Gene
- GeneLoc Exon Structure for
- LOC105373525
No data available for mRNA/cDNA for LOC105373525 Gene
Expression for LOC105373525 Gene
No Expression Related Data Available
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373525 Gene
Orthologs for LOC105373525 Gene
No data available for Orthologs for LOC105373525 Gene
Paralogs for LOC105373525 Gene
No data available for Paralogs for LOC105373525 Gene
Variants for LOC105373525 Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373525 Gene
Disorders for LOC105373525 Gene
No disorders were found for LOC105373525 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373525 Gene
Publications for LOC105373525 Gene
No publications were found for LOC105373525 Gene.
No data available for Mastermind for LOC105373525 Gene
Products for LOC105373525 Gene
- Browse OriGene Antibodies
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- Custom Assay Services
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- Origene Custom Protein Services for LOC105373525
- Browse OriGene Inhibitory RNA Products For LOC105373525
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- Browse Sino Biological cDNA Clones
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- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC105373525
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC105373525
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Sources for LOC105373525 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB