Aliases for LOC105373514 Gene

Subcategory (RNA class) for LOC105373514 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC105373514 Gene

  • Uncharacterized LOC105373514 3
  • Novel Transcript 5
  • NONHSAG028737 92
  • HSALNG0017381 167
  • AC093894.2 5
  • Lnc-RFX8-1 168

External Ids for LOC105373514 Gene

Previous GeneCards Identifiers for LOC105373514 Gene

  • GC02U903249

Summaries for LOC105373514 Gene

GeneCards Summary for LOC105373514 Gene

LOC105373514 (Uncharacterized LOC105373514) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105373514 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373514 Gene

Genomics for LOC105373514 Gene

GeneHancer (GH) Regulatory Elements for LOC105373514 Gene

Promoters and enhancers for LOC105373514 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J101566 Enhancer 1 Ensembl 500.7 +0.6 607 2.6 EP300 FOXK2 TCF12 NRF1 NCOR1 KDM6A TCF7 FOXA1 CUX1 ZBTB25 LOC105373514 ENSG00000286047
GH02J101570 Enhancer 0.7 Ensembl ENCODE 0.7 -2.5 -2493 2 ZSCAN9 CEBPG SPI1 CREM THAP11 GATA3 KLF16 CEBPB RCOR2 ENSG00000234389 LOC105373514 piR-32285-054
GH02J101558 Enhancer 0.8 Ensembl ENCODE 0.4 +7.2 7208 5 ZNF274 TEAD1 FOXA2 SPI1 FOXP1 FOS SMAD4 PRDM1 BCL6 TCF7L2 RFX8 LOC105373514 ENSG00000286047
GH02J101557 Enhancer 0.8 FANTOM5 0.4 +10.7 10726 0.3 TCF12 TCF7 SKI TEAD1 ZKSCAN8 ZSCAN9 FOXA2 CEBPB USF1 GABPA LOC105373514 ENSG00000286047
GH02J101546 Enhancer 0.9 FANTOM5 Ensembl ENCODE 0.4 +21.5 21507 3.2 FOS CEBPB JUN ZNF507 HLF JUND CEBPA RFX8 LINC01870 MAP4K4 RNF149 ENSG00000286047 LOC105373514
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373514 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373514 Gene

Genomic Locations for LOC105373514 Gene
chr2:101,551,588-101,567,908
(GRCh38/hg38)
Size:
16,321 bases
Orientation:
Minus strand

Genomic View for LOC105373514 Gene

Genes around LOC105373514 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373514 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373514 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373514 Gene

Proteins for LOC105373514 Gene

Post-translational modifications for LOC105373514 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373514 Gene

Domains & Families for LOC105373514 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373514 Gene

Function for LOC105373514 Gene

Phenotypes From GWAS Catalog for LOC105373514 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373514 Gene

Localization for LOC105373514 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373514 Gene

Pathways & Interactions for LOC105373514 Gene

PathCards logo

SuperPathways for LOC105373514 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105373514 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373514 Gene

Drugs & Compounds for LOC105373514 Gene

No Compound Related Data Available

Transcripts for LOC105373514 Gene

mRNA/cDNA for LOC105373514 Gene

5 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
2 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373514 Gene

No ASD Table

Relevant External Links for LOC105373514 Gene

GeneLoc Exon Structure for
LOC105373514

Expression for LOC105373514 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105373514

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373514 Gene

Orthologs for LOC105373514 Gene

Evolution for LOC105373514 Gene

ENSEMBL:
Gene Tree for LOC105373514 (if available)
TreeFam:
Gene Tree for LOC105373514 (if available)

No data available for Orthologs for LOC105373514 Gene

Paralogs for LOC105373514 Gene

No data available for Paralogs for LOC105373514 Gene

Variants for LOC105373514 Gene

Additional dbSNP identifiers (rs#s) for LOC105373514 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373514 Gene

Disorders for LOC105373514 Gene

No disorders were found for LOC105373514 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373514 Gene

Publications for LOC105373514 Gene

No publications were found for LOC105373514 Gene.

No data available for Mastermind for LOC105373514 Gene

Products for LOC105373514 Gene

Sources for LOC105373514 Gene