Aliases for LOC105373508 Gene

Subcategory (RNA class) for LOC105373508 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105373508 Gene

  • Uncharacterized LOC105373508 3

External Ids for LOC105373508 Gene

Previous GeneCards Identifiers for LOC105373508 Gene

  • GC02U903716

Summaries for LOC105373508 Gene

GeneCards Summary for LOC105373508 Gene

LOC105373508 (Uncharacterized LOC105373508) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373508 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373508 Gene

Genomics for LOC105373508 Gene

GeneHancer (GH) Regulatory Elements for LOC105373508 Gene

Promoters and enhancers for LOC105373508 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J100739 Enhancer 0.7 Ensembl dbSUPER 750.6 0.0 -46 0.2 ZBTB40 ATF1 EHMT2 GABPA CREM VEZF1 ENSG00000286737 LOC105373508 lnc-NPAS2-1 lnc-CHST10-5
GH02J100741 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.6 +4.0 3954 5.4 RBPJ SP1 TFE3 PRDM1 ZNF644 KAT8 POLR2A RXRA PRDM10 RXRB lnc-CHST10-5 ENSG00000232034 NPAS2 ENSG00000230140 ENSG00000286737 LOC105373508 lnc-NPAS2-1 HSALNG0017327
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373508 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373508 Gene

Genomic Locations for LOC105373508 Gene
chr2:100,739,947-100,747,314
(GRCh38/hg38)
Size:
7,368 bases
Orientation:
Plus strand

Genomic View for LOC105373508 Gene

Genes around LOC105373508 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373508 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373508 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373508 Gene

Proteins for LOC105373508 Gene

Post-translational modifications for LOC105373508 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373508 Gene

Domains & Families for LOC105373508 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373508 Gene

Function for LOC105373508 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373508 Gene

Localization for LOC105373508 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373508 Gene

Pathways & Interactions for LOC105373508 Gene

PathCards logo

SuperPathways for LOC105373508 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373508 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373508 Gene

Drugs & Compounds for LOC105373508 Gene

No Compound Related Data Available

Transcripts for LOC105373508 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373508 Gene

No ASD Table

Relevant External Links for LOC105373508 Gene

GeneLoc Exon Structure for
LOC105373508

No data available for mRNA/cDNA for LOC105373508 Gene

Expression for LOC105373508 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373508 Gene

Orthologs for LOC105373508 Gene

No data available for Orthologs and Evolution for LOC105373508 Gene

Paralogs for LOC105373508 Gene

No data available for Paralogs for LOC105373508 Gene

Variants for LOC105373508 Gene

Sequence variations from dbSNP and Humsavar for LOC105373508 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000127663 -- 100,739,118(+) G/C upstream_transcript_variant
rs1000224597 -- 100,743,454(+) C/A intron_variant
rs1001011275 -- 100,747,099(+) G/A intron_variant
rs1001504953 -- 100,744,462(+) G/A intron_variant
rs1001520328 -- 100,743,628(+) G/A/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373508 Gene

Disorders for LOC105373508 Gene

No disorders were found for LOC105373508 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373508 Gene

Publications for LOC105373508 Gene

No publications were found for LOC105373508 Gene.

No data available for External Links for LOC105373508 Gene

Products for LOC105373508 Gene

Sources for LOC105373508 Gene