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Aliases for LOC105373383 Gene

Subcategory (RNA class) for LOC105373383 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373383 Gene

  • Uncharacterized LOC105373383 3
  • AF274858.3 5

External Ids for LOC105373383 Gene

Previous GeneCards Identifiers for LOC105373383 Gene

  • GC0XU902064

Summaries for LOC105373383 Gene

GeneCards Summary for LOC105373383 Gene

LOC105373383 (Uncharacterized LOC105373383) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373383 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373383 Gene

Genomics for LOC105373383 Gene

GeneHancer (GH) Regulatory Elements for LOC105373383 Gene

Promoters and enhancers for LOC105373383 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI153598 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 557.7 +0.2 182 2.6 SIN3A ZNF121 POLR2B GLIS2 ZNF213 ZNF143 SP3 REST ZNF610 ZSCAN16 LOC105373383 CCNQ KRT18P48 CETN2
GH0XI153900 Enhancer 1.4 FANTOM5 Ensembl ENCODE 23.3 +303.2 303165 4.2 HDGF GLI4 TCF12 ZNF766 GLIS2 GATA2 ZNF143 FOS REST ATF4 AVPR2 HCFC1 SNORA70 DKC1 PLXNA3 TMEM187 SNORA56 EMD LOC105373383 SLC10A3
GH0XI154595 Enhancer 0.8 Ensembl ENCODE 15.2 +997.2 997236 1.5 CTCF MAX CEBPB SALL2 FEZF1 EP300 RAD21 SP1 JUND POU5F1 LOC105373383 GDI1 GAB3 PDZD4 L1CAM FAM3A ENSG00000232155 CTAG1A
GH0XI153383 Enhancer 0.7 FANTOM5 9.9 -215.9 -215934 0.3 ZNF493 ZNF140 ZNF266 ZNF155 ZNF791 ZNF157 ADNP ZNF621 ZNF645 ZNF488 HCFC1 EMD LOC105373383 TMEM187 MECP2 PNMA6B SLC6A8 ZNF275 PNMA6E GC0XP153357
GH0XI153591 Enhancer 0.3 ENCODE 5.4 -7.7 -7742 0.2 EBF1 LOC105373383 CCNQ GC0XP153580
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105373383 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373383 Gene

Genomic Locations for LOC105373383 Gene
chrX:153,599,340-153,604,353
(GRCh38/hg38)
Size:
5,014 bases
Orientation:
Plus strand
chrX:152,864,795-152,869,808
(GRCh37/hg19)

Genomic View for LOC105373383 Gene

Genes around LOC105373383 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373383 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373383 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373383 Gene

Proteins for LOC105373383 Gene

Post-translational modifications for LOC105373383 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373383 Gene

Domains & Families for LOC105373383 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373383 Gene

Function for LOC105373383 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373383 Gene

Localization for LOC105373383 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373383 Gene

Pathways & Interactions for LOC105373383 Gene

SuperPathways for LOC105373383 Gene

No Data Available

Interacting Proteins for LOC105373383 Gene

Gene Ontology (GO) - Biological Process for LOC105373383 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373383 Gene

Drugs & Compounds for LOC105373383 Gene

No Compound Related Data Available

Transcripts for LOC105373383 Gene

mRNA/cDNA for LOC105373383 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373383 Gene

No ASD Table

Relevant External Links for LOC105373383 Gene

GeneLoc Exon Structure for
LOC105373383

Expression for LOC105373383 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373383 Gene

Orthologs for LOC105373383 Gene

Evolution for LOC105373383 Gene

ENSEMBL:
Gene Tree for LOC105373383 (if available)
TreeFam:
Gene Tree for LOC105373383 (if available)

No data available for Orthologs for LOC105373383 Gene

Paralogs for LOC105373383 Gene

No data available for Paralogs for LOC105373383 Gene

Variants for LOC105373383 Gene

Sequence variations from dbSNP and Humsavar for LOC105373383 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1001760172 -- 153,598,714(+) C/G upstream_transcript_variant
rs1004198215 -- 153,597,367(+) A/T upstream_transcript_variant
rs1007164853 -- 153,599,644(+) T/C non_coding_transcript_variant
rs1008745066 -- 153,597,885(+) G/A upstream_transcript_variant
rs1011733849 -- 153,598,251(+) A/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373383 Gene

Disorders for LOC105373383 Gene

Additional Disease Information for LOC105373383

No disorders were found for LOC105373383 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105373383 Gene

Publications for LOC105373383 Gene

No publications were found for LOC105373383 Gene.

Products for LOC105373383 Gene

Sources for LOC105373383 Gene

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