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Aliases for LOC105373368 Gene

Subcategory (RNA class) for LOC105373368 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373368 Gene

  • Uncharacterized LOC105373368 3
  • AF274855.1 5

External Ids for LOC105373368 Gene

Previous GeneCards Identifiers for LOC105373368 Gene

  • GC0XU902127

Summaries for LOC105373368 Gene

GeneCards Summary for LOC105373368 Gene

LOC105373368 (Uncharacterized LOC105373368) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373368 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373368 Gene

Genomics for LOC105373368 Gene

GeneHancer (GH) Regulatory Elements for LOC105373368 Gene

Promoters and enhancers for LOC105373368 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI151912 Promoter 0.7 EPDnew 550.8 +1.1 1098 0.1 SNIP1 NFATC3 NRF1 MAGEA4 LOC105373368
GH0XI151981 Enhancer 1.1 Ensembl ENCODE 12.1 -70.3 -70332 6.4 FOXA2 ZNF766 FOS REST ZNF592 MBD2 NFIL3 SMARCA4 ETV4 STAT3 MIR224 MAGEA4 LOC105373368 GABRE GC0XM152046
GH0XI151988 Enhancer 0.7 ENCODE 12.1 -75.1 -75094 1.6 HDAC1 MEIS2 LEF1 ATF1 TEAD4 E4F1 RELA CTBP1 NCOR1 ATF7 LOC105373368 MAGEA4 GABRE GC0XM152046
GH0XI151916 Promoter 0.5 EPDnew 0.8 -2.3 -2274 0.1 MAGEA4 LOC105373368 MIR224
GH0XI151917 Promoter 0.5 EPDnew 0.8 -2.9 -2918 0.1 MAGEA4 LOC105373368 MIR224
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105373368 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373368 Gene

Genomic Locations for LOC105373368 Gene
chrX:151,904,431-151,913,968
(GRCh38/hg38)
Size:
9,538 bases
Orientation:
Minus strand
chrX:151,072,903-151,082,440
(GRCh37/hg19)

Genomic View for LOC105373368 Gene

Genes around LOC105373368 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373368 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373368 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373368 Gene

Proteins for LOC105373368 Gene

Post-translational modifications for LOC105373368 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373368 Gene

Domains & Families for LOC105373368 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373368 Gene

Function for LOC105373368 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373368 Gene

Localization for LOC105373368 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373368 Gene

Pathways & Interactions for LOC105373368 Gene

SuperPathways for LOC105373368 Gene

No Data Available

Interacting Proteins for LOC105373368 Gene

Gene Ontology (GO) - Biological Process for LOC105373368 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373368 Gene

Drugs & Compounds for LOC105373368 Gene

No Compound Related Data Available

Transcripts for LOC105373368 Gene

mRNA/cDNA for LOC105373368 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373368 Gene

No ASD Table

Relevant External Links for LOC105373368 Gene

GeneLoc Exon Structure for
LOC105373368

Expression for LOC105373368 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373368 Gene

Orthologs for LOC105373368 Gene

Evolution for LOC105373368 Gene

ENSEMBL:
Gene Tree for LOC105373368 (if available)
TreeFam:
Gene Tree for LOC105373368 (if available)

No data available for Orthologs for LOC105373368 Gene

Paralogs for LOC105373368 Gene

No data available for Paralogs for LOC105373368 Gene

Variants for LOC105373368 Gene

Sequence variations from dbSNP and Humsavar for LOC105373368 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000438596 -- 151,903,943(-) G/T downstream_transcript_variant
rs1000440711 -- 151,909,585(-) C/T intron_variant
rs1000742114 -- 151,912,674(-) C/T upstream_transcript_variant
rs1001108572 -- 151,905,455(-) G/T intron_variant
rs1001682943 -- 151,904,908(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373368 Gene

Disorders for LOC105373368 Gene

Additional Disease Information for LOC105373368

No disorders were found for LOC105373368 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105373368 Gene

Publications for LOC105373368 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 58

Products for LOC105373368 Gene

Sources for LOC105373368 Gene

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