Aliases for LOC105373270 Gene

Subcategory (RNA class) for LOC105373270 Gene

ncRNA

Aliases for LOC105373270 Gene

  • Uncharacterized LOC105373270 3

External Ids for LOC105373270 Gene

Previous GeneCards Identifiers for LOC105373270 Gene

  • GC01U904486

Summaries for LOC105373270 Gene

GeneCards Summary for LOC105373270 Gene

LOC105373270 (Uncharacterized LOC105373270) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373270 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373270 Gene

Genomics for LOC105373270 Gene

GeneHancer (GH) Regulatory Elements for LOC105373270 Gene

Promoters and enhancers for LOC105373270 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J245811 Enhancer 0.3 ENCODE 500.7 -0.6 -631 0.3 SREBF1 LOC105373270 piR-49423-021 lnc-SMYD3-6 SMYD3
GH01J245806 Enhancer 1.1 Ensembl ENCODE 0.7 -3.4 -3390 4.8 FOXK2 EP300 NRF1 NCOR1 KDM6A TCF7 FOXA1 TGIF2 SKI TEAD1 LOC105373270 piR-49423-021 lnc-SMYD3-6 SMYD3
GH01J245822 Enhancer 0.8 Ensembl ENCODE 0.4 +10.8 10803 1.7 JUND FOS TEAD1 CEBPB FOSL2 CHD2 JUN STAT3 EP300 TCF7L2 LOC105373270 piR-40824 lnc-SMYD3-6 SMYD3
GH01J245791 Enhancer 0.8 ENCODE 0.4 -20.7 -20716 0.2 AFF1 MYC CTBP1 MXI1 HDAC3 NCOR1 ZNF316 NFIC GATA3 NKRF piR-49423-021 LOC105373270 lnc-SMYD3-6 SMYD3
GH01J245787 Enhancer 0.8 Ensembl ENCODE 0.4 -24.1 -24092 1.6 JUND FOS REST USF1 STAT3 CEBPG RCOR1 ATF4 BHLHE40 NFE2L2 ENSG00000231612 piR-49423-021 LOC105373270 lnc-SMYD3-6 SMYD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373270 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373270 Gene

Genomic Locations for LOC105373270 Gene
chr1:245,812,590-245,813,854
(GRCh38/hg38)
Size:
1,265 bases
Orientation:
Plus strand

Genomic View for LOC105373270 Gene

Genes around LOC105373270 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373270 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373270 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373270 Gene

Proteins for LOC105373270 Gene

Post-translational modifications for LOC105373270 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373270 Gene

Domains & Families for LOC105373270 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373270 Gene

Function for LOC105373270 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373270 Gene

Localization for LOC105373270 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373270 Gene

Pathways & Interactions for LOC105373270 Gene

PathCards logo

SuperPathways for LOC105373270 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105373270 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373270 Gene

Drugs & Compounds for LOC105373270 Gene

No Compound Related Data Available

Transcripts for LOC105373270 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373270 Gene

No ASD Table

Relevant External Links for LOC105373270 Gene

GeneLoc Exon Structure for
LOC105373270

No data available for mRNA/cDNA for LOC105373270 Gene

Expression for LOC105373270 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373270 Gene

Orthologs for LOC105373270 Gene

No data available for Orthologs and Evolution for LOC105373270 Gene

Paralogs for LOC105373270 Gene

No data available for Paralogs for LOC105373270 Gene

Variants for LOC105373270 Gene

Additional dbSNP identifiers (rs#s) for LOC105373270 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373270 Gene

Disorders for LOC105373270 Gene

No disorders were found for LOC105373270 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373270 Gene

Publications for LOC105373270 Gene

No publications were found for LOC105373270 Gene.

No data available for Mastermind for LOC105373270 Gene

Products for LOC105373270 Gene

Sources for LOC105373270 Gene