Aliases for LOC105373210 Gene

Subcategory (RNA class) for LOC105373210 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105373210 Gene

  • Uncharacterized LOC105373210 3

External Ids for LOC105373210 Gene

Previous GeneCards Identifiers for LOC105373210 Gene

  • GC01U905028

Summaries for LOC105373210 Gene

GeneCards Summary for LOC105373210 Gene

LOC105373210 (Uncharacterized LOC105373210) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373210 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373210 Gene

Genomics for LOC105373210 Gene

GeneHancer (GH) Regulatory Elements for LOC105373210 Gene

Promoters and enhancers for LOC105373210 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J234749 Enhancer 0.7 Ensembl dbSUPER 750.6 -0.8 -778 0.2 ZNF316 NFE2 MAFG HDAC2 BCOR NFIC DPF2 KDM1A HDGF ZMYM3 LOC105373210 lnc-IRF2BP2-6 ENSG00000279261
GH01J234743 Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.6 +2.9 2862 6.1 ZNF785 ZBTB40 ZBTB6 RBPJ SMARCE1 ZNF362 L3MBTL2 ZNF652 ZNF280D ELF3 ENSG00000228830 IRF2BP2 TARBP1 LOC105373210 lnc-IRF2BP2-6 piR-45940
GH01J234750 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.6 -2.5 -2545 2.5 RBPJ NR2F6 ATF1 CREB1 TEAD4 RERE ELF3 SP1 CEBPG TFE3 LOC105373210 ENSG00000279261
GH01J234754 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 -7.0 -7037 1.5 SMARCE1 USF2 MYC L3MBTL2 MAX DACH1 CBFA2T2 BACH1 SP7 ZSCAN21 RPS21P1 ARID4B IRF2BP2 ENSG00000279261 LOC105373210
GH01J234758 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -11.0 -10978 4.2 HLF SP1 ZNF148 MLLT1 CREM SP5 TRIM24 GMEB1 IKZF1 ZBTB33 ENSG00000279261 PP2672 ENSG00000238005 LOC105373210
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373210 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373210 Gene

Genomic Locations for LOC105373210 Gene
chr1:234,745,770-234,748,723
(GRCh38/hg38)
Size:
2,954 bases
Orientation:
Minus strand

Genomic View for LOC105373210 Gene

Genes around LOC105373210 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373210 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373210 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373210 Gene

Proteins for LOC105373210 Gene

Post-translational modifications for LOC105373210 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373210 Gene

Domains & Families for LOC105373210 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373210 Gene

Function for LOC105373210 Gene

Phenotypes From GWAS Catalog for LOC105373210 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373210 Gene

Localization for LOC105373210 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373210 Gene

Pathways & Interactions for LOC105373210 Gene

PathCards logo

SuperPathways for LOC105373210 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373210 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373210 Gene

Drugs & Compounds for LOC105373210 Gene

No Compound Related Data Available

Transcripts for LOC105373210 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373210 Gene

No ASD Table

Relevant External Links for LOC105373210 Gene

GeneLoc Exon Structure for
LOC105373210

No data available for mRNA/cDNA for LOC105373210 Gene

Expression for LOC105373210 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373210 Gene

Orthologs for LOC105373210 Gene

No data available for Orthologs and Evolution for LOC105373210 Gene

Paralogs for LOC105373210 Gene

No data available for Paralogs for LOC105373210 Gene

Variants for LOC105373210 Gene

Sequence variations from dbSNP and Humsavar for LOC105373210 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1001008695 -- 234,745,496(-) G/A downstream_transcript_variant
rs1001371912 -- 234,748,312(-) T/C non_coding_transcript_variant
rs1001823020 -- 234,747,994(-) T/A intron_variant
rs1002666003 -- 234,749,115(-) G/A/C upstream_transcript_variant
rs1003163335 -- 234,749,817(-) C/G/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373210 Gene

Disorders for LOC105373210 Gene

No disorders were found for LOC105373210 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373210 Gene

Publications for LOC105373210 Gene

No publications were found for LOC105373210 Gene.

No data available for External Links for LOC105373210 Gene

Products for LOC105373210 Gene

Sources for LOC105373210 Gene