Aliases for LOC105373180 Gene

Subcategory (RNA class) for LOC105373180 Gene

ncRNA

Aliases for LOC105373180 Gene

  • Uncharacterized LOC105373180 3

External Ids for LOC105373180 Gene

Previous GeneCards Identifiers for LOC105373180 Gene

  • GC0XU902051

Summaries for LOC105373180 Gene

GeneCards Summary for LOC105373180 Gene

LOC105373180 (Uncharacterized LOC105373180) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373180 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373180 Gene

Genomics for LOC105373180 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105373180 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ039930 Enhancer 0.8 Ensembl ENCODE 600.7 +1.3 1321 3.4 REST SP1 NR3C1 CEBPB FOS CHD2 MAZ EP300 ZFHX2 POLR2A LOC105373180 lnc-ATP6AP2-5 HSALNG0137386 LOC107985687
GH0XJ039952 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +25.5 25495 3.4 CREB1 GATAD2A ZNF629 TFE3 SIX5 RCOR2 FOXA1 ZNF143 ZIC2 RXRB HSALNG0137386 LOC105373180 LOC107985687
GH0XJ039936 Enhancer 0.6 ENCODE 0.4 +8.4 8350 1.7 PKNOX1 SP1 RAD21 HNF4A VEZF1 RXRA MEIS2 JUND HNF4G ZNF148 LOC105373180 lnc-ATP6AP2-5 HSALNG0137386 LOC107985687
GH0XJ039941 Enhancer 0.6 Ensembl ENCODE 0.4 +12.7 12721 0.6 JUND RCOR1 GLIS1 CHD2 LOC105373180 HSALNG0137386 LOC107985687
GH0XJ039946 Enhancer 0.4 ENCODE 0.4 +18.1 18118 1 ZIC2 FOS BHLHE40 HSALNG0137386 LOC105373180 LOC107985687
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373180 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105373180 Gene

Genomic Locations for LOC105373180 Gene
chrX:39,928,980-39,939,253
(GRCh38/hg38)
Size:
10,274 bases
Orientation:
Plus strand

Genomic View for LOC105373180 Gene

Genes around LOC105373180 on UCSC Golden Path with GeneCards custom track
LOC105373180 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105373180 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373180 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373180 Gene

Proteins for LOC105373180 Gene

Post-translational modifications for LOC105373180 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373180 Gene

Domains & Families for LOC105373180 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373180 Gene

Function for LOC105373180 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373180 Gene

Localization for LOC105373180 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373180 Gene

Pathways & Interactions for LOC105373180 Gene

PathCards logo

SuperPathways for LOC105373180 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373180 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373180 Gene

Drugs & Compounds for LOC105373180 Gene

No Compound Related Data Available

Transcripts for LOC105373180 Gene

LOC105373180 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373180 Gene

No ASD Table

Relevant External Links for LOC105373180 Gene

GeneLoc Exon Structure for
LOC105373180

No data available for mRNA/cDNA for LOC105373180 Gene

Expression for LOC105373180 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373180 Gene

Orthologs for LOC105373180 Gene

No data available for Orthologs and Evolution for LOC105373180 Gene

Paralogs for LOC105373180 Gene

No data available for Paralogs for LOC105373180 Gene

Variants for LOC105373180 Gene

Additional dbSNP identifiers (rs#s) for LOC105373180 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373180 Gene

Disorders for LOC105373180 Gene

No disorders were found for LOC105373180 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373180 Gene

Publications for LOC105373180 Gene

No publications were found for LOC105373180 Gene.

No data available for Mastermind for LOC105373180 Gene

Products for LOC105373180 Gene

Sources for LOC105373180 Gene