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Aliases for LOC105373175 Gene

Subcategory (RNA class) for LOC105373175 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105373175 Gene

  • Uncharacterized LOC105373175 3

External Ids for LOC105373175 Gene

Previous GeneCards Identifiers for LOC105373175 Gene

  • GC0XU902107

Summaries for LOC105373175 Gene

GeneCards Summary for LOC105373175 Gene

LOC105373175 (Uncharacterized LOC105373175) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373175 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373175 Gene

Genomics for LOC105373175 Gene

GeneHancer (GH) Regulatory Elements for LOC105373175 Gene

Promoters and enhancers for LOC105373175 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ039308 Enhancer 0.9 Ensembl ENCODE 0.4 -10.5 -10515 5.8 TCF7L2 ZNF37A SOX6 OSR2 GABPA IKZF1 FOSL1 NR2F1 NFIC NR2F2 LOC105373175 ENSG00000224610 LINC01281
GH0XJ039295 Promoter 0.5 Ensembl 0.7 +2.2 2185 4.4 LOC105373175 ENSG00000224610 GC0XM039082 RNU6-591P
GH0XJ039261 Enhancer 0.8 Ensembl ENCODE 0.3 +37.9 37885 1 CTCF RAD21 REST TRIM22 ESRRA NR2F1 SMC3 ZNF654 ENSG00000224610 LOC105373175 RNU6-591P GC0XM039082
GH0XJ039324 Promoter 0.6 Ensembl 0.3 -26.5 -26515 3 FOXA1 LINC01281 LOC105373175 ENSG00000224610
GH0XJ039318 Enhancer 0.5 Ensembl ENCODE 0.4 -18.8 -18815 1.6 NR2F2 LINC01281 LOC105373175 ENSG00000224610
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373175 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373175 Gene

Genomic Locations for LOC105373175 Gene
chrX:39,258,101-39,299,786
(GRCh38/hg38)
Size:
41,686 bases
Orientation:
Minus strand

Genomic View for LOC105373175 Gene

Genes around LOC105373175 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373175 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373175 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373175 Gene

Proteins for LOC105373175 Gene

Post-translational modifications for LOC105373175 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373175 Gene

Domains & Families for LOC105373175 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373175 Gene

Function for LOC105373175 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373175 Gene

Localization for LOC105373175 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373175 Gene

Pathways & Interactions for LOC105373175 Gene

PathCards logo

SuperPathways for LOC105373175 Gene

No Data Available

Interacting Proteins for LOC105373175 Gene

Gene Ontology (GO) - Biological Process for LOC105373175 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373175 Gene

Drugs & Compounds for LOC105373175 Gene

No Compound Related Data Available

Transcripts for LOC105373175 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373175 Gene

No ASD Table

Relevant External Links for LOC105373175 Gene

GeneLoc Exon Structure for
LOC105373175

No data available for mRNA/cDNA for LOC105373175 Gene

Expression for LOC105373175 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373175 Gene

Orthologs for LOC105373175 Gene

No data available for Orthologs and Evolution for LOC105373175 Gene

Paralogs for LOC105373175 Gene

No data available for Paralogs for LOC105373175 Gene

Variants for LOC105373175 Gene

Sequence variations from dbSNP and Humsavar for LOC105373175 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000023422 -- 39,274,173(-) T/A intron_variant
rs1000124037 -- 39,294,078(-) G/A/C intron_variant
rs1000176372 -- 39,283,561(-) T/A intron_variant
rs1000233760 -- 39,281,419(-) A/G intron_variant
rs1000249600 -- 39,270,135(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373175 Gene

Disorders for LOC105373175 Gene

No disorders were found for LOC105373175 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373175 Gene

Publications for LOC105373175 Gene

No publications were found for LOC105373175 Gene.

No data available for External Links for LOC105373175 Gene

Products for LOC105373175 Gene

Sources for LOC105373175 Gene

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