Aliases for LOC105373115 Gene

Data sources for LOC105373115 Gene:

RNA type for LOC105373115 Gene

ncRNA

Aliases for LOC105373115 Gene

External Ids for LOC105373115 Gene

Previous GeneCards Identifiers for LOC105373115 Gene

  • GC01U904315

Summaries for LOC105373115 Gene

GeneCards Summary for LOC105373115 Gene

LOC105373115 (Uncharacterized LOC105373115) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373115 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105373115 Gene

Genomics for LOC105373115 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105373115 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J226520 Enhancer 0.7 Ensembl ENCODE 250.7 +0.5 500 2.2 CTCF REST RFX1 ZNF768 ZMYM3 SP1 RAD21 EGR2 BMI1 KDM1A HSALNG0011083-001 HSALNG0011083-002 LOC105373115 piR-31292-012 STUM PARP1
GH01J226540 Promoter/Enhancer 1.2 Ensembl ENCODE 0.4 -21.4 -21403 2.4 CEBPA NFIC YY1 FEZF1 KMT2B SMAD4 RXRA ZNF511 SAP130 RARA ENSG00000287627 LOC105373116 STUM LOC105373115 PARP1
GH01J226526 Enhancer 0.6 ENCODE 0.4 -6.2 -6155 0.2 SP2 GABPB1 GABPA EHMT2 PKNOX1 DIDO1 ZBTB40 MEIS2 DDX20 CBX3 STUM LOC105373115 ENSG00000287627 PARP1
GH01J226532 Enhancer 0.3 Ensembl 0.4 -12.2 -12201 1.2 YY1 PARP1 ENSG00000287627 LOC105373115 STUM
GH01J226529 Enhancer 0.2 ENCODE 0.4 -9.2 -9248 0.5 PARP1 LOC105373115 ENSG00000287627 STUM
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373115 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105373115 Gene

Latest Assembly
chr1:226,516,144-226,520,800
(GRCh38/hg38)
Size:
4,657 bases
Orientation:
Minus strand

Genomic View for LOC105373115 Gene

Genes around LOC105373115 on UCSC Golden Path with GeneCards custom track
LOC105373115 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105373115 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373115 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373115 Gene

Proteins for LOC105373115 Gene

Post-translational modifications for LOC105373115 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373115 Gene

Domains & Families for LOC105373115 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105373115 Gene

Function for LOC105373115 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373115 Gene

Localization for LOC105373115 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373115 Gene

Pathways & Interactions for LOC105373115 Gene

PathCards logo

SuperPathways for LOC105373115 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105373115 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105373115 Gene

Drugs & Compounds for LOC105373115 Gene

No Compound Related Data Available

Transcripts for LOC105373115 Gene

LOC105373115 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373115 Gene

No ASD Table

Relevant External Links for LOC105373115 Gene

GeneLoc Exon Structure for
LOC105373115

No data available for mRNA/cDNA for LOC105373115 Gene

Expression for LOC105373115 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373115 Gene

Orthologs for LOC105373115 Gene

No data available for Orthologs and Evolution for LOC105373115 Gene

Paralogs for LOC105373115 Gene

No data available for Paralogs for LOC105373115 Gene

Variants for LOC105373115 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105373115 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373115 Gene

Disorders for LOC105373115 Gene

No disorders were found for LOC105373115 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373115 Gene

Publications for LOC105373115 Gene

No publications were found for LOC105373115 Gene.

No data available for Mastermind for LOC105373115 Gene

Products for LOC105373115 Gene

Sources for LOC105373115 Gene