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Aliases for LOC105373095 Gene

Subcategory (RNA class) for LOC105373095 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105373095 Gene

  • Uncharacterized LOC105373095 3
  • AL022328.2 5

External Ids for LOC105373095 Gene

Previous GeneCards Identifiers for LOC105373095 Gene

  • GC22U901226

Summaries for LOC105373095 Gene

GeneCards Summary for LOC105373095 Gene

LOC105373095 (Uncharacterized LOC105373095) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373095 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373095 Gene

Genomics for LOC105373095 Gene

GeneHancer (GH) Regulatory Elements for LOC105373095 Gene

Promoters and enhancers for LOC105373095 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J050209 Enhancer 0.9 ENCODE dbSUPER 656.6 +0.2 242 1.3 ZNF768 CTCF PKNOX1 RB1 RAD21 ZFHX2 PATZ1 SMC3 RBM22 ZNF143 LOC105373095 MLC1 SELENOO MOV10L1 PANX2 ENSG00000272836
GH22J050626 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 29.5 -417.8 -417849 2.4 HDGF ZNF493 ARID4B SIN3A YBX1 GLI4 ZNF2 ZNF280A GLIS2 KLF7 ARSA BRD1 ZBED4 RABL2B ENSG00000272836 TUBGCP6 PLXNB2 ALG12 CHKB LOC105373095
GH22J050183 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 18.3 +24.4 24351 3.9 ARID4B DMAP1 ZNF2 ZNF48 GTF3C2 ZNF121 GLIS2 ZNF213 ZNF143 KLF7 TRABD BRD1 LOC105373095 SELENOO ZBED4 ALG12 ENSG00000273253 CHKB PLXNB2 LMF2
GH22J050339 Enhancer 0.9 ENCODE 34 -130.1 -130050 2.1 HDGF ZNF493 ZNF2 KLF7 ZNF488 ZNF585B GLIS1 MYNN NBN ZNF300 BRD1 ALG12 RABL2B PLXNB2 ENSG00000272836 CHKB TUBGCP6 ZBED4 LMF2 ENSG00000273192
GH22J049957 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.6 +247.1 247117 11.7 HDGF PKNOX1 CLOCK FOXA2 SMAD1 MLX ARNT ARID4B SIN3A DMAP1 PIM3 MIR6821 ALG12 ZBED4 RABL2B BRD1 PLXNB2 CHKB LMF2 ENSG00000273192
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105373095 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373095 Gene

Genomic Locations for LOC105373095 Gene
chr22:50,208,461-50,210,174
(GRCh38/hg38)
Size:
1,714 bases
Orientation:
Minus strand
chr22:50,646,890-50,647,971
(GRCh37/hg19)
Size:
1,082 bases
Orientation:
Minus strand

Genomic View for LOC105373095 Gene

Genes around LOC105373095 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373095 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373095 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373095 Gene

Proteins for LOC105373095 Gene

Post-translational modifications for LOC105373095 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373095 Gene

Domains & Families for LOC105373095 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373095 Gene

Function for LOC105373095 Gene

Phenotypes From GWAS Catalog for LOC105373095 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373095 Gene

Localization for LOC105373095 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373095 Gene

Pathways & Interactions for LOC105373095 Gene

SuperPathways for LOC105373095 Gene

No Data Available

Interacting Proteins for LOC105373095 Gene

Gene Ontology (GO) - Biological Process for LOC105373095 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373095 Gene

Drugs & Compounds for LOC105373095 Gene

No Compound Related Data Available

Transcripts for LOC105373095 Gene

mRNA/cDNA for LOC105373095 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373095 Gene

No ASD Table

Relevant External Links for LOC105373095 Gene

GeneLoc Exon Structure for
LOC105373095

Expression for LOC105373095 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373095 Gene

Orthologs for LOC105373095 Gene

Evolution for LOC105373095 Gene

ENSEMBL:
Gene Tree for LOC105373095 (if available)
TreeFam:
Gene Tree for LOC105373095 (if available)

No data available for Orthologs for LOC105373095 Gene

Paralogs for LOC105373095 Gene

No data available for Paralogs for LOC105373095 Gene

Variants for LOC105373095 Gene

Sequence variations from dbSNP and Humsavar for LOC105373095 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000016390 -- 50,210,937(-) C/G upstream_transcript_variant
rs1000382216 -- 50,211,207(-) C/T upstream_transcript_variant
rs1000823472 -- 50,208,362(-) G/A downstream_transcript_variant
rs1001653542 -- 50,211,983(-) G/A upstream_transcript_variant
rs1002830160 -- 50,210,095(-) C/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373095 Gene

Disorders for LOC105373095 Gene

No disorders were found for LOC105373095 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373095 Gene

Publications for LOC105373095 Gene

No publications were found for LOC105373095 Gene.

Products for LOC105373095 Gene

Sources for LOC105373095 Gene

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