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Aliases for LOC105373021 Gene

Subcategory (RNA class) for LOC105373021 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373021 Gene

  • Uncharacterized LOC105373021 3
  • AL049749.1 5

External Ids for LOC105373021 Gene

Previous GeneCards Identifiers for LOC105373021 Gene

  • GC22U901133

Summaries for LOC105373021 Gene

GeneCards Summary for LOC105373021 Gene

LOC105373021 (Uncharacterized LOC105373021) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373021 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373021 Gene

Genomics for LOC105373021 Gene

GeneHancer (GH) Regulatory Elements for LOC105373021 Gene

Promoters and enhancers for LOC105373021 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I036703 Promoter 1.1 EPDnew 550.8 -0.4 -381 0.1 CTCF RB1 SAP130 ZNF449 KLF17 SIN3A ZIC2 ZNF48 HIC1 ZFHX2 CACNG2 LOC105373021 GC22P036628
GH22I036644 Enhancer 0.8 ENCODE 12.6 -59.5 -59469 0.2 ELF3 NFIB KLF17 SIN3A ZSCAN9 ZBTB40 ZEB1 CHAMP1 ZNF766 ZSCAN5C LOC105373021 CACNG2 ENSG00000229971 PVALB ENSG00000234979 GC22P036628
GH22I036737 Enhancer 0.4 Ensembl ENCODE 5.8 +33.8 33783 1 LOC105373021 PIR39680 GC22M036764 PIR38212
GH22I036733 Enhancer 0.4 ENCODE 5.8 +30.4 30398 0.9 RUNX3 EZH2 ENSG00000234979 PVALB ENSG00000229971 IL2RB ENSG00000231467 TMPRSS6 LOC105373021 PIR39680 GC22M036764 PIR38212
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105373021 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373021 Gene

Genomic Locations for LOC105373021 Gene
chr22:36,703,918-36,721,472
(GRCh38/hg38)
Size:
17,555 bases
Orientation:
Plus strand
chr22:37,099,963-37,117,517
(GRCh37/hg19)

Genomic View for LOC105373021 Gene

Genes around LOC105373021 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373021 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373021 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373021 Gene

Proteins for LOC105373021 Gene

Post-translational modifications for LOC105373021 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373021 Gene

Domains & Families for LOC105373021 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373021 Gene

Function for LOC105373021 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373021 Gene

Localization for LOC105373021 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373021 Gene

Pathways & Interactions for LOC105373021 Gene

SuperPathways for LOC105373021 Gene

No Data Available

Interacting Proteins for LOC105373021 Gene

Gene Ontology (GO) - Biological Process for LOC105373021 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373021 Gene

Drugs & Compounds for LOC105373021 Gene

No Compound Related Data Available

Transcripts for LOC105373021 Gene

mRNA/cDNA for LOC105373021 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373021 Gene

No ASD Table

Relevant External Links for LOC105373021 Gene

GeneLoc Exon Structure for
LOC105373021

Expression for LOC105373021 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373021 Gene

Orthologs for LOC105373021 Gene

Evolution for LOC105373021 Gene

ENSEMBL:
Gene Tree for LOC105373021 (if available)
TreeFam:
Gene Tree for LOC105373021 (if available)

No data available for Orthologs for LOC105373021 Gene

Paralogs for LOC105373021 Gene

No data available for Paralogs for LOC105373021 Gene

Variants for LOC105373021 Gene

Sequence variations from dbSNP and Humsavar for LOC105373021 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs587777546 pathogenic, Bardet-Biedl syndrome 19 36,763,972(+) C/T intron_variant
rs112218090 benign, not provided 36,762,951(+) G/A intron_variant
rs1000026886 -- 36,764,548(+) T/A intron_variant
rs1000036458 -- 36,727,636(+) C/T intron_variant
rs1000067366 -- 36,724,378(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373021 Gene

Disorders for LOC105373021 Gene

Additional Disease Information for LOC105373021

No disorders were found for LOC105373021 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105373021 Gene

Publications for LOC105373021 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for LOC105373021 Gene

Sources for LOC105373021 Gene

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