Aliases for LOC105372988 Gene

Data sources for LOC105372988 Gene:

Subcategory (RNA class) for LOC105372988 Gene

lncRNA

Aliases for LOC105372988 Gene

External Ids for LOC105372988 Gene

Previous GeneCards Identifiers for LOC105372988 Gene

  • GC22U901219

Summaries for LOC105372988 Gene

GeneCards Summary for LOC105372988 Gene

LOC105372988 (Uncharacterized LOC105372988) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105372988 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372988 Gene

Genomics for LOC105372988 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372988 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372988 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372988 Gene

Latest Assembly
chr22:30,182,818-30,207,599
(GRCh38/hg38)
Size:
24,782 bases
Orientation:
Minus strand

Previous Assembly
chr22:30,580,633-30,603,098
(GRCh37/hg19 by Ensembl)
Size:
22,466 bases
Orientation:
Minus strand

Genomic View for LOC105372988 Gene

Genes around LOC105372988 on UCSC Golden Path with GeneCards custom track
LOC105372988 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105372988 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372988 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372988 Gene

Proteins for LOC105372988 Gene

Post-translational modifications for LOC105372988 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372988 Gene

Domains & Families for LOC105372988 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372988 Gene

Function for LOC105372988 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372988 Gene

Localization for LOC105372988 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372988 Gene

Pathways & Interactions for LOC105372988 Gene

PathCards logo

SuperPathways for LOC105372988 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372988 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372988 Gene

Drugs & Compounds for LOC105372988 Gene

No Compound Related Data Available

Transcripts for LOC105372988 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105372988 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EEFDEA_9606 lncRNA 2210 1

Ensembl: ENST00000432360 (view in UCSC) ,

URS000020F742_9606 lncRNA 301 2

LNCipedia: lnc-LIF-1:1,

NONCODE: NONHSAT084759.2,

URS00009B01FE_9606 lncRNA 298 2

LncBook: HSALNT0276851,

NONCODE: NONHSAT192801.1,

URS0001BDCBC1_9606 lncRNA 2505 1

LncBook: HSALNT0276849,

URS0001BDDE4F_9606 lncRNA 2091 1

LncBook: HSALNT0276847,

LOC105372988 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372988 Gene

No ASD Table

Relevant External Links for LOC105372988 Gene

GeneLoc Exon Structure for
LOC105372988

No data available for mRNA/cDNA for LOC105372988 Gene

Expression for LOC105372988 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372988 Gene

Orthologs for LOC105372988 Gene

Evolution for LOC105372988 Gene

ENSEMBL:
Gene Tree for LOC105372988 (if available)
TreeFam:
Gene Tree for LOC105372988 (if available)

No data available for Orthologs for LOC105372988 Gene

Paralogs for LOC105372988 Gene

No data available for Paralogs for LOC105372988 Gene

Variants for LOC105372988 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105372988 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372988 Gene

Disorders for LOC105372988 Gene

No disorders were found for LOC105372988 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372988 Gene

Publications for LOC105372988 Gene

No publications were found for LOC105372988 Gene.

No data available for Mastermind for LOC105372988 Gene

Products for LOC105372988 Gene

Sources for LOC105372988 Gene