Aliases for LOC105372969 Gene

Subcategory (RNA class) for LOC105372969 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372969 Gene

  • Uncharacterized LOC105372969 3

External Ids for LOC105372969 Gene

Previous GeneCards Identifiers for LOC105372969 Gene

  • GC22U901065
  • GC22M025395
  • GC22M025463
  • GC22M025641
  • GC22M025827
  • GC22M026013
  • GC22M026192
  • GC22M026372

Summaries for LOC105372969 Gene

GeneCards Summary for LOC105372969 Gene

LOC105372969 (Uncharacterized LOC105372969) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372969 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372969 Gene

Genomics for LOC105372969 Gene

GeneHancer (GH) Regulatory Elements for LOC105372969 Gene

Promoters and enhancers for LOC105372969 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J025282 Promoter 0.9 Ensembl 750.6 0.0 -36 1 CTCF ZNF121 ZSCAN21 GLIS2 ZBTB8A PRDM10 LEF1 ZSCAN4 PATZ1 ZNF692 ENSG00000233577 ENSG00000285690 ENSG00000285968 LOC105372969 SNRPD3 RF00998-086
GH22J025283 Promoter 0.7 Ensembl 750.6 +0.9 864 0.4 PATZ1 EZH2 ZFHX2 ETS1 ZNF398 SP3 POLR2A ENSG00000233577 ENSG00000285690 ENSG00000285968 LOC105372969 piR-36393-340
GH22J025288 Enhancer 0.2 Ensembl 0.4 -5.6 -5636 0.6 ENSG00000285690 ENSG00000285968 LOC105372969 RF00998-086
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372969 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372969 Gene

Genomic Locations for LOC105372969 Gene
chr22:25,280,703-25,283,065
(GRCh38/hg38)
Size:
2,363 bases
Orientation:
Minus strand
chr22:24,237,627-24,237,655
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for LOC105372969 Gene

Genes around LOC105372969 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372969 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372969 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372969 Gene

Proteins for LOC105372969 Gene

Post-translational modifications for LOC105372969 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372969 Gene

Domains & Families for LOC105372969 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372969 Gene

Function for LOC105372969 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372969 Gene

Localization for LOC105372969 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372969 Gene

Pathways & Interactions for LOC105372969 Gene

PathCards logo

SuperPathways for LOC105372969 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372969 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372969 Gene

Drugs & Compounds for LOC105372969 Gene

No Compound Related Data Available

Transcripts for LOC105372969 Gene

mRNA/cDNA for LOC105372969 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372969 Gene

No ASD Table

Relevant External Links for LOC105372969 Gene

GeneLoc Exon Structure for
LOC105372969

Expression for LOC105372969 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372969 Gene

Orthologs for LOC105372969 Gene

No data available for Orthologs and Evolution for LOC105372969 Gene

Paralogs for LOC105372969 Gene

No data available for Paralogs for LOC105372969 Gene

Variants for LOC105372969 Gene

Sequence variations from dbSNP and Humsavar for LOC105372969 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000635808 -- 25,282,916(-) C/T intron_variant
rs1000871436 -- 25,282,766(-) C/G/T intron_variant
rs1001897536 -- 25,282,721(-) G/T intron_variant
rs1002164219 -- 25,282,449(-) G/A intron_variant
rs1002495304 -- 25,282,601(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372969 Gene

Disorders for LOC105372969 Gene

No disorders were found for LOC105372969 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372969 Gene

Publications for LOC105372969 Gene

No publications were found for LOC105372969 Gene.

No data available for External Links for LOC105372969 Gene

Products for LOC105372969 Gene

Sources for LOC105372969 Gene