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Aliases for LOC105372957 Gene

Subcategory (RNA class) for LOC105372957 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372957 Gene

  • Uncharacterized LOC105372957 3

External Ids for LOC105372957 Gene

Previous GeneCards Identifiers for LOC105372957 Gene

  • GC22U901108

Summaries for LOC105372957 Gene

GeneCards Summary for LOC105372957 Gene

LOC105372957 (Uncharacterized LOC105372957) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105372957 include Agammaglobulinemia 2, Autosomal Recessive.

Additional gene information for LOC105372957 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372957 Gene

Genomics for LOC105372957 Gene

GeneHancer (GH) Regulatory Elements for LOC105372957 Gene

Promoters and enhancers for LOC105372957 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J023565 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE 600.7 -0.7 -669 1.4 SP5 KLF14 PRDM1 EGR1 GLIS2 ZIC2 PATZ1 IRF2 SOX13 KLF9 LOC105372957 ENSG00000224277 IGLL1 GGT5 GC22P023592
GH22J023567 Enhancer 0.5 dbSUPER 600.7 +0.8 802 0.9 ZIC2 ZBTB20 NFIA ZFP64 ZNF398 PRDM10 ENSG00000224277 LOC105372957 GC22M023576 GC22M023575 PIR35257
GH22J023568 Enhancer 0.4 dbSUPER 600.7 +1.9 1904 0.8 RCOR2 NFIA NR2F6 ENSG00000224277 LOC105372957 PIR35257 GC22M023576 GC22M023575
GH22J023570 Enhancer 0.2 dbSUPER 0.7 +3.8 3809 0.9 ENSG00000224277 LOC105372957 PIR35257 GC22M023576 GC22M023575
GH22J023553 Enhancer 0.3 Ensembl 0.4 -12.8 -12769 0.8 RFX1 IGLL1 DRICH1 RGL4 GUSBP11 ENSG00000251357 SLC2A11 MIF-AS1 MIF RN7SL268P GC22P023592
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372957 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372957 Gene

Genomic Locations for LOC105372957 Gene
chr22:23,566,970-23,573,098
(GRCh38/hg38)
Size:
6,129 bases
Orientation:
Plus strand

Genomic View for LOC105372957 Gene

Genes around LOC105372957 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372957 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372957 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372957 Gene

Proteins for LOC105372957 Gene

Post-translational modifications for LOC105372957 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372957 Gene

Domains & Families for LOC105372957 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372957 Gene

Function for LOC105372957 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372957 Gene

Localization for LOC105372957 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372957 Gene

Pathways & Interactions for LOC105372957 Gene

PathCards logo

SuperPathways for LOC105372957 Gene

No Data Available

Interacting Proteins for LOC105372957 Gene

Gene Ontology (GO) - Biological Process for LOC105372957 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372957 Gene

Drugs & Compounds for LOC105372957 Gene

No Compound Related Data Available

Transcripts for LOC105372957 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372957 Gene

No ASD Table

Relevant External Links for LOC105372957 Gene

GeneLoc Exon Structure for
LOC105372957

No data available for mRNA/cDNA for LOC105372957 Gene

Expression for LOC105372957 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372957 Gene

Orthologs for LOC105372957 Gene

No data available for Orthologs and Evolution for LOC105372957 Gene

Paralogs for LOC105372957 Gene

No data available for Paralogs for LOC105372957 Gene

Variants for LOC105372957 Gene

Sequence variations from dbSNP and Humsavar for LOC105372957 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1064422 pathogenic, Agammaglobulinemia 2, autosomal recessive 23,573,483(+) G/A downstream_transcript_variant
rs1064424 benign, Agammaglobulinemia 2, autosomal recessive 23,573,515(+) A/G downstream_transcript_variant
rs111903752 benign, not specified, Agammaglobulinemia 2, autosomal recessive 23,573,423(+) A/G/T downstream_transcript_variant
rs112775194 uncertain-significance, Agammaglobulinemia 2, autosomal recessive 23,573,471(+) G/A downstream_transcript_variant
rs139491925 likely-benign, uncertain-significance, not specified, Agammaglobulinemia 2, autosomal recessive 23,573,292(+) T/A downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372957 Gene

Disorders for LOC105372957 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105372957 Gene - From: GeneCards

Disorder Aliases PubMed IDs
agammaglobulinemia 2, autosomal recessive
  • agm2
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105372957: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372957 Gene

Publications for LOC105372957 Gene

No publications were found for LOC105372957 Gene.

No data available for External Links for LOC105372957 Gene

Products for LOC105372957 Gene

Sources for LOC105372957 Gene

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