Aliases for LOC105372887 Gene

Subcategory (RNA class) for LOC105372887 Gene

ncRNA

Aliases for LOC105372887 Gene

  • Uncharacterized LOC105372887 3

External Ids for LOC105372887 Gene

Previous GeneCards Identifiers for LOC105372887 Gene

  • GC01U905099

Summaries for LOC105372887 Gene

GeneCards Summary for LOC105372887 Gene

LOC105372887 (Uncharacterized LOC105372887) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372887 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372887 Gene

Genomics for LOC105372887 Gene

GeneHancer (GH) Regulatory Elements for LOC105372887 Gene

Promoters and enhancers for LOC105372887 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J208093 Enhancer 0.8 Ensembl ENCODE 500.7 -0.7 -743 0.4 CTCF REST RAD21 SMC3 ARNT CEBPB EHMT2 NR2F1 ZNF189 ZNF654 LOC105372887 PLXNA2 lnc-CD34-3
GH01J208094 Enhancer 0.7 FANTOM5 500.7 0.0 -42 0.2 EP300 RFX1 CTBP1 ATF2 CREB1 MXI1 BMI1 ATF3 RCOR1 CEBPG LOC105372887 PLXNA2 lnc-CD34-3
GH01J208087 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -4.8 -4811 3.8 ZIC2 ZNF341 REST RCOR1 PKNOX1 FOXP2 RFX5 STAT1 TCF7L2 ZNF18 PLXNA2 LOC105372887 lnc-CD34-3
GH01J208100 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +7.8 7835 4 EP300 ZIC2 FOXA2 OSR2 NR2F2 SMC3 MXI1 FOS ZBTB33 PBX2 PLXNA2 ENSG00000287220 LOC105372887
GH01J208105 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +14.1 14135 8.2 USF1 JUND REST TOE1 EP300 ZKSCAN8 ZBTB17 TCF7L2 SMARCC1 SMARCC2 ENSG00000287220 HSALNG0010148 LOC105372887 PLXNA2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372887 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372887 Gene

Genomic Locations for LOC105372887 Gene
chr1:208,094,566-208,110,988
(GRCh38/hg38)
Size:
16,423 bases
Orientation:
Plus strand

Genomic View for LOC105372887 Gene

Genes around LOC105372887 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372887 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372887 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372887 Gene

Proteins for LOC105372887 Gene

Post-translational modifications for LOC105372887 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372887 Gene

Domains & Families for LOC105372887 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372887 Gene

Function for LOC105372887 Gene

Phenotypes From GWAS Catalog for LOC105372887 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372887 Gene

Localization for LOC105372887 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372887 Gene

Pathways & Interactions for LOC105372887 Gene

PathCards logo

SuperPathways for LOC105372887 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105372887 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372887 Gene

Drugs & Compounds for LOC105372887 Gene

No Compound Related Data Available

Transcripts for LOC105372887 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372887 Gene

No ASD Table

Relevant External Links for LOC105372887 Gene

GeneLoc Exon Structure for
LOC105372887

No data available for mRNA/cDNA for LOC105372887 Gene

Expression for LOC105372887 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372887 Gene

Orthologs for LOC105372887 Gene

No data available for Orthologs and Evolution for LOC105372887 Gene

Paralogs for LOC105372887 Gene

No data available for Paralogs for LOC105372887 Gene

Variants for LOC105372887 Gene

Additional dbSNP identifiers (rs#s) for LOC105372887 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372887 Gene

Disorders for LOC105372887 Gene

No disorders were found for LOC105372887 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372887 Gene

Publications for LOC105372887 Gene

No publications were found for LOC105372887 Gene.

No data available for Mastermind for LOC105372887 Gene

Products for LOC105372887 Gene

Sources for LOC105372887 Gene