Aliases for LOC105372877 Gene

Subcategory (RNA class) for LOC105372877 Gene

ncRNA

Aliases for LOC105372877 Gene

  • Uncharacterized LOC105372877 3

External Ids for LOC105372877 Gene

Previous GeneCards Identifiers for LOC105372877 Gene

  • GC01U905065

Summaries for LOC105372877 Gene

GeneCards Summary for LOC105372877 Gene

LOC105372877 (Uncharacterized LOC105372877) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372877 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372877 Gene

Genomics for LOC105372877 Gene

GeneHancer (GH) Regulatory Elements for LOC105372877 Gene

Promoters and enhancers for LOC105372877 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J206752 Enhancer 0.9 FANTOM5 Ensembl 500.7 -1.9 -1907 3.8 FOS GATAD2B NONO FOSL1 ZNF639 ZNF512B ZNF407 HLTF NCOA3 MTA2 LOC105372877 MAPKAPK2 IL10 IL24 IL20 PIGR FCAMR EIF2D RASSF5 IL19
GH01J206748 Enhancer 0.7 FANTOM5 Ensembl 0.7 +2.8 2793 3.2 FOS CTCF NR3C1 ZFP36 RNF2 CEBPB CBX8 ENSG00000199349 MAPKAPK2 IL19 IL10 IL20 RASSF5 IKBKE LOC105372877
GH01J206765 Enhancer 1.1 ENCODE dbSUPER 0.4 -14.8 -14846 1.1 NRF1 FOS TCF7 REST HES1 RELA TOE1 RUNX1 CTBP1 TRIM22 RF00017-458 lnc-IL19-2 IL24 PIGR FCAMR IL20 C4BPB LOC105372877
GH01J206757 Enhancer 0.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.5 -6507 3.8 SPI1 ZSCAN29 IL24 IL20 MAPKAPK2 FCMR IL10 IKBKE RASSF5 lnc-IL19-2 LOC105372877
GH01J206763 Enhancer 0.3 Ensembl 0.4 -11.7 -11707 0.2 ZNF366 ZNF512 IL24 PIGR FCAMR IL20 lnc-IL19-2 LOC105372877
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372877 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372877 Gene

Genomic Locations for LOC105372877 Gene
chr1:206,748,331-206,751,594
(GRCh38/hg38)
Size:
3,264 bases
Orientation:
Minus strand

Genomic View for LOC105372877 Gene

Genes around LOC105372877 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372877 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372877 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372877 Gene

Proteins for LOC105372877 Gene

Post-translational modifications for LOC105372877 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372877 Gene

Domains & Families for LOC105372877 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372877 Gene

Function for LOC105372877 Gene

Phenotypes From GWAS Catalog for LOC105372877 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372877 Gene

Localization for LOC105372877 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372877 Gene

Pathways & Interactions for LOC105372877 Gene

PathCards logo

SuperPathways for LOC105372877 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105372877 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372877 Gene

Drugs & Compounds for LOC105372877 Gene

No Compound Related Data Available

Transcripts for LOC105372877 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372877 Gene

No ASD Table

Relevant External Links for LOC105372877 Gene

GeneLoc Exon Structure for
LOC105372877

No data available for mRNA/cDNA for LOC105372877 Gene

Expression for LOC105372877 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372877 Gene

Orthologs for LOC105372877 Gene

No data available for Orthologs and Evolution for LOC105372877 Gene

Paralogs for LOC105372877 Gene

No data available for Paralogs for LOC105372877 Gene

Variants for LOC105372877 Gene

Additional dbSNP identifiers (rs#s) for LOC105372877 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372877 Gene

Disorders for LOC105372877 Gene

No disorders were found for LOC105372877 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372877 Gene

Publications for LOC105372877 Gene

No publications were found for LOC105372877 Gene.

No data available for Mastermind for LOC105372877 Gene

Products for LOC105372877 Gene

Sources for LOC105372877 Gene