Aliases for LOC105372859 Gene

Data sources for LOC105372859 Gene:

Subcategory (RNA class) for LOC105372859 Gene

ncRNA

Aliases for LOC105372859 Gene

External Ids for LOC105372859 Gene

Previous GeneCards Identifiers for LOC105372859 Gene

  • GC22U901190

Summaries for LOC105372859 Gene

GeneCards Summary for LOC105372859 Gene

LOC105372859 (Uncharacterized LOC105372859) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372859 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372859 Gene

Genomics for LOC105372859 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372859 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J019289 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 -0.6 -619 3.8 CHD2 CEBPA MNT IKZF1 SMAD5 IRF2 HES1 MBD2 BHLHE40 ZBTB7B CLTCL1 ENSG00000287146 LOC105372859 LINC01311 TRMT2A ESS2 CDC45 DGCR8 SLC25A1 RANBP1
GH22J019296 Enhancer 0.7 Ensembl 0.4 +5.1 5102 0.7 MNT IKZF1 VEZF1 RUNX1 ZBTB5 ZFP91 SKIL CBX1 SP1 ZC3H8 CLTCL1 ENSG00000287146 LOC105372859 piR-35674-331 MRPL40
GH22J019293 Enhancer 0.4 dbSUPER 0.7 +2.3 2345 1 TEAD2 ZNF740 BCOR CLTCL1 UFD1 ENSG00000287146 LOC105372859 piR-35674-331 MRPL40
GH22J019320 Enhancer 0.7 Ensembl 0.3 +31.8 31805 5.2 MCM7 MCM3 CEBPB RUNX1 ZBTB5 NKRF HLTF SPI1 POLR2A MCM5 UFD1 RPL7AP70 DGCR11 E2F6P1 DGCR8 LINC01311 CLTCL1 piR-35674-331 LOC105372859 ENSG00000287146
GH22J019336 Enhancer 0.7 ENCODE 0.3 +44.5 44477 0.2 HOMEZ FOXA2 SAP130 RARA TEAD3 RBM22 HNF4A ELF3 RXRB KDM1A CLTCL1 piR-35674-331 HSALNG0134016 LOC105372859 ENSG00000287146 MRPL40 HIRA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372859 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372859 Gene

Latest Assembly
chr22:19,291,796-19,351,456
(GRCh38/hg38)
Size:
59,661 bases
Orientation:
Plus strand

Genomic View for LOC105372859 Gene

Genes around LOC105372859 on UCSC Golden Path with GeneCards custom track
LOC105372859 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105372859 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372859 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372859 Gene

Proteins for LOC105372859 Gene

Post-translational modifications for LOC105372859 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372859 Gene

Domains & Families for LOC105372859 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372859 Gene

Function for LOC105372859 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372859 Gene

Localization for LOC105372859 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372859 Gene

Pathways & Interactions for LOC105372859 Gene

PathCards logo

SuperPathways for LOC105372859 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372859 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372859 Gene

Drugs & Compounds for LOC105372859 Gene

No Compound Related Data Available

Transcripts for LOC105372859 Gene

LOC105372859 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372859 Gene

No ASD Table

Relevant External Links for LOC105372859 Gene

GeneLoc Exon Structure for
LOC105372859

No data available for mRNA/cDNA for LOC105372859 Gene

Expression for LOC105372859 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372859 Gene

Orthologs for LOC105372859 Gene

No data available for Orthologs and Evolution for LOC105372859 Gene

Paralogs for LOC105372859 Gene

No data available for Paralogs for LOC105372859 Gene

Variants for LOC105372859 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105372859 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372859 Gene

Disorders for LOC105372859 Gene

No disorders were found for LOC105372859 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372859 Gene

Publications for LOC105372859 Gene

No publications were found for LOC105372859 Gene.

No data available for Mastermind for LOC105372859 Gene

Products for LOC105372859 Gene

Sources for LOC105372859 Gene