Aliases for LOC105372857 Gene

Subcategory (RNA class) for LOC105372857 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372857 Gene

  • Uncharacterized LOC105372857 3

External Ids for LOC105372857 Gene

Previous GeneCards Identifiers for LOC105372857 Gene

  • GC01U904779

Summaries for LOC105372857 Gene

GeneCards Summary for LOC105372857 Gene

LOC105372857 (Uncharacterized LOC105372857) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372857 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372857 Gene

Genomics for LOC105372857 Gene

GeneHancer (GH) Regulatory Elements for LOC105372857 Gene

Promoters and enhancers for LOC105372857 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J206070 Enhancer 0.2 Ensembl 750.6 +1.2 1239 0.6 LOC105372857 CTSE piR-57503 RHEX
GH01J206076 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.6 -3.4 -3361 3 SMARCE1 CC2D1A HLF L3MBTL2 MAX TEAD4 ZKSCAN8 CBFA2T2 SMARCA4 ZNF639 CTSE LOC105372857 piR-52475-002 RHEX
GH01J206065 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 +5.1 5098 2.8 SREBF1 SMARCE1 RUNX1 CC2D1A TEAD4 SP1 CBFA2T2 MLLT1 SMARCA4 ZNF639 IL24 RHEX LOC105372857 piR-57503
GH01J206059 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +13.3 13338 2.4 MYC MAX ZNF687 POLR2A ELF1 RHEX piR-57503 LOC105372857 ENSG00000285417 lnc-RHEX-1
GH01J206055 Enhancer 0.9 ENCODE 0.4 +16.5 16472 1 RBPJ NR2F6 MIXL1 NFYC ZNF652 RERE ELF3 SP1 CEBPG MLLT1 EIF2D ELK4 RHEX piR-57503 LOC105372857 ENSG00000285417 lnc-RHEX-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372857 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372857 Gene

Genomic Locations for LOC105372857 Gene
chr1:206,057,447-206,072,340
(GRCh38/hg38)
Size:
14,894 bases
Orientation:
Minus strand

Genomic View for LOC105372857 Gene

Genes around LOC105372857 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372857 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372857 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372857 Gene

Proteins for LOC105372857 Gene

Post-translational modifications for LOC105372857 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372857 Gene

Domains & Families for LOC105372857 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372857 Gene

Function for LOC105372857 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372857 Gene

Localization for LOC105372857 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372857 Gene

Pathways & Interactions for LOC105372857 Gene

PathCards logo

SuperPathways for LOC105372857 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372857 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372857 Gene

Drugs & Compounds for LOC105372857 Gene

No Compound Related Data Available

Transcripts for LOC105372857 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372857 Gene

No ASD Table

Relevant External Links for LOC105372857 Gene

GeneLoc Exon Structure for
LOC105372857

No data available for mRNA/cDNA for LOC105372857 Gene

Expression for LOC105372857 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372857 Gene

Orthologs for LOC105372857 Gene

No data available for Orthologs and Evolution for LOC105372857 Gene

Paralogs for LOC105372857 Gene

No data available for Paralogs for LOC105372857 Gene

Variants for LOC105372857 Gene

Sequence variations from dbSNP and Humsavar for LOC105372857 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000508854 -- 206,070,790(-) T/C intron_variant
rs1000946707 -- 206,059,250(-) A/G intron_variant
rs1001317424 -- 206,058,225(-) G/C non_coding_transcript_variant
rs1001323051 -- 206,071,487(-) A/G intron_variant
rs1001327539 -- 206,058,572(-) T/G non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372857 Gene

Disorders for LOC105372857 Gene

No disorders were found for LOC105372857 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372857 Gene

Publications for LOC105372857 Gene

No publications were found for LOC105372857 Gene.

No data available for External Links for LOC105372857 Gene

Products for LOC105372857 Gene

Sources for LOC105372857 Gene