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Aliases for LOC105372826 Gene

Subcategory (RNA class) for LOC105372826 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372826 Gene

  • Uncharacterized LOC105372826 3

External Ids for LOC105372826 Gene

Previous GeneCards Identifiers for LOC105372826 Gene

  • GC21U900750

Summaries for LOC105372826 Gene

GeneCards Summary for LOC105372826 Gene

LOC105372826 (Uncharacterized LOC105372826) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372826 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372826 Gene

Genomics for LOC105372826 Gene

GeneHancer (GH) Regulatory Elements for LOC105372826 Gene

Promoters and enhancers for LOC105372826 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J043946 Promoter 0.5 EPDnew 600.7 -0.5 -450 0.1 AGPAT3 LOC105372826 AATBC RRP1 TMEM97P1 RNU6-859P PIR42091
GH21J043938 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.4 +7.4 7368 1.6 HDGF SP1 CC2D1A CTCF CBFA2T2 ZNF148 NKRF MLLT1 GTF2F1 ZNF687 AGPAT3 ICOSLG TRAPPC10 CFAP410 LOC105372826 GC21M043920 RNU6-859P
GH21J043920 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.3 +23.3 23329 6.3 ZNF473 SP1 ZFX ZKSCAN8 CBFA2T2 ZNF148 ZNF121 CEBPG GTF2F1 ZNF687 RRP1B LINC01424 PWP2 ITGB2-AS1 TRAPPC10 ENSG00000184441 AGPAT3 CSTB AATBC RNU6-859P
GH21J043943 Enhancer 0.7 Ensembl dbSUPER 0.7 +2.0 2013 1 MAFK PKNOX1 ZBTB33 ZNF316 MAFG MAFF EMSY RNU6-859P AGPAT3 AATBC RRP1 TMEM97P1 TRAPPC10 LOC105372826 GC21M043920
GH21J043956 Enhancer 1.1 Ensembl ENCODE 0.4 -11.4 -11352 3.3 SP1 POLR2A GTF2F1 CDC5L MAFK ZBTB7A RELA CREM MLLT1 ZNF547 UBE2G2 RRP1B PWP2 ENSG00000184441 U2AF1 ITGB2-AS1 TRAPPC10 TRPM2 PKNOX1 MTND5P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372826 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372826 Gene

Genomic Locations for LOC105372826 Gene
chr21:43,945,403-43,946,514
(GRCh38/hg38)
Size:
1,112 bases
Orientation:
Minus strand

Genomic View for LOC105372826 Gene

Genes around LOC105372826 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372826 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372826 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372826 Gene

Proteins for LOC105372826 Gene

Post-translational modifications for LOC105372826 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372826 Gene

Domains & Families for LOC105372826 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372826 Gene

Function for LOC105372826 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372826 Gene

Localization for LOC105372826 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372826 Gene

Pathways & Interactions for LOC105372826 Gene

PathCards logo

SuperPathways for LOC105372826 Gene

No Data Available

Interacting Proteins for LOC105372826 Gene

Gene Ontology (GO) - Biological Process for LOC105372826 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372826 Gene

Drugs & Compounds for LOC105372826 Gene

No Compound Related Data Available

Transcripts for LOC105372826 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372826 Gene

No ASD Table

Relevant External Links for LOC105372826 Gene

GeneLoc Exon Structure for
LOC105372826

No data available for mRNA/cDNA for LOC105372826 Gene

Expression for LOC105372826 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372826 Gene

Orthologs for LOC105372826 Gene

No data available for Orthologs and Evolution for LOC105372826 Gene

Paralogs for LOC105372826 Gene

No data available for Paralogs for LOC105372826 Gene

Variants for LOC105372826 Gene

Sequence variations from dbSNP and Humsavar for LOC105372826 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1000255516 -- 43,946,926(-) G/A upstream_transcript_variant
rs1001905389 -- 43,945,348(-) C/A/T downstream_transcript_variant
rs1001916663 -- 43,945,624(-) C/T non_coding_transcript_variant
rs1002223746 -- 43,945,159(-) C/A downstream_transcript_variant
rs1002772659 -- 43,948,317(-) A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372826 Gene

Disorders for LOC105372826 Gene

No disorders were found for LOC105372826 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372826 Gene

Publications for LOC105372826 Gene

No publications were found for LOC105372826 Gene.

No data available for External Links for LOC105372826 Gene

Products for LOC105372826 Gene

Sources for LOC105372826 Gene

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