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Aliases for LOC105372813 Gene

Subcategory (RNA class) for LOC105372813 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372813 Gene

  • Uncharacterized LOC105372813 3

External Ids for LOC105372813 Gene

Previous GeneCards Identifiers for LOC105372813 Gene

  • GC21U900614

Summaries for LOC105372813 Gene

GeneCards Summary for LOC105372813 Gene

LOC105372813 (Uncharacterized LOC105372813) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372813 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372813 Gene

Genomics for LOC105372813 Gene

GeneHancer (GH) Regulatory Elements for LOC105372813 Gene

Promoters and enhancers for LOC105372813 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J041668 Enhancer 0.4 FANTOM5 dbSUPER 600.7 +0.0 37 0.3 LOC105372813 RIPK4 LINC00111 GC21P041658
GH21J041663 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.7 -4.0 -4030 2 ELF3 ZNF687 SP1 PPARG KAT8 IKZF1 IKZF2 CEBPA GATAD2A ZNF7 ZBTB21 LOC105372813 GC21P041658
GH21J041673 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 +4.9 4897 1.7 CREB1 NR2F1 CUX1 CTCF ATF2 ATF7 LINC00112 LINC00479 ENSG00000236883 LOC105372813 LINC00111 GC21P041658
GH21J041660 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -8.6 -8648 1.4 ZBTB33 GABPA SP1 ESRRA ZFHX2 ZNF189 FOS MTA1 RARA RAD21 GC21P041658 LOC105372813
GH21J041671 Enhancer 0.6 dbSUPER 0.7 +2.9 2904 1.5 ARID3A YBX1 ZNF776 CTBP1 ZKSCAN1 GATAD2B ZNF366 ZNF687 NBN LOC105372813 LINC00111 GC21P041658
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372813 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372813 Gene

Genomic Locations for LOC105372813 Gene
chr21:41,668,949-41,672,645
(GRCh38/hg38)
Size:
3,697 bases
Orientation:
Plus strand

Genomic View for LOC105372813 Gene

Genes around LOC105372813 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372813 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372813 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372813 Gene

Proteins for LOC105372813 Gene

Post-translational modifications for LOC105372813 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372813 Gene

Domains & Families for LOC105372813 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372813 Gene

Function for LOC105372813 Gene

Phenotypes From GWAS Catalog for LOC105372813 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372813 Gene

Localization for LOC105372813 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372813 Gene

Pathways & Interactions for LOC105372813 Gene

PathCards logo

SuperPathways for LOC105372813 Gene

No Data Available

Interacting Proteins for LOC105372813 Gene

Gene Ontology (GO) - Biological Process for LOC105372813 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372813 Gene

Drugs & Compounds for LOC105372813 Gene

No Compound Related Data Available

Transcripts for LOC105372813 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372813 Gene

No ASD Table

Relevant External Links for LOC105372813 Gene

GeneLoc Exon Structure for
LOC105372813

No data available for mRNA/cDNA for LOC105372813 Gene

Expression for LOC105372813 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372813 Gene

Orthologs for LOC105372813 Gene

No data available for Orthologs and Evolution for LOC105372813 Gene

Paralogs for LOC105372813 Gene

No data available for Paralogs for LOC105372813 Gene

Variants for LOC105372813 Gene

Sequence variations from dbSNP and Humsavar for LOC105372813 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1000682390 -- 41,670,203(+) G/A intron_variant
rs1001074787 -- 41,668,602(+) C/A/T upstream_transcript_variant
rs1001386410 -- 41,670,426(+) C/T non_coding_transcript_variant
rs1001734466 -- 41,670,297(+) C/T non_coding_transcript_variant
rs1001822337 -- 41,669,635(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372813 Gene

Disorders for LOC105372813 Gene

No disorders were found for LOC105372813 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372813 Gene

Publications for LOC105372813 Gene

No publications were found for LOC105372813 Gene.

No data available for External Links for LOC105372813 Gene

Products for LOC105372813 Gene

Sources for LOC105372813 Gene

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