Aliases for LOC105372812 Gene

Subcategory (RNA class) for LOC105372812 Gene

ncRNA

Aliases for LOC105372812 Gene

  • Uncharacterized LOC105372812 3

External Ids for LOC105372812 Gene

Previous GeneCards Identifiers for LOC105372812 Gene

  • GC21U900639

Summaries for LOC105372812 Gene

GeneCards Summary for LOC105372812 Gene

LOC105372812 (Uncharacterized LOC105372812) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372812 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372812 Gene

Genomics for LOC105372812 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372812 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J041639 Enhancer 0.3 Ensembl dbSUPER 600.7 +1.9 1920 0.4 LOC105372812 lnc-RIPK4-7 TMPRSS2 RIPK4
GH21J041638 Enhancer 0.3 Ensembl dbSUPER 600.7 +0.4 420 0.2 LOC105372812 lnc-RIPK4-7 TMPRSS2 RIPK4
GH21J041640 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +4.9 4920 4.4 IKZF2 ZNF341 EED SP1 DPF2 RELB SMARCC1 JUND GATAD2B NR3C1 MX1 LOC105372812 lnc-RIPK4-7 TMPRSS2 RIPK4
GH21J041629 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -5.3 -5280 6.4 CEBPG CREB1 ZBTB33 YBX1 PRDM10 ZNF300 PRDM1 ZNF776 ZIC2 PATZ1 PRDM15 ENSG00000227698 LINC00112 LINC00479 ENSG00000236545 ENSG00000251778 ZBTB21 piR-48759-192 LOC105372812 TMPRSS2
GH21J041648 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +10.8 10834 1.4 TCF12 IKZF2 EED DPF2 JUND RUNX3 GATAD2B FOS BCL11A IKZF1 HSALNG0133232 lnc-RIPK4-7 LOC105372812 RIPK4 TMPRSS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372812 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372812 Gene

Genomic Locations for LOC105372812 Gene
chr21:41,637,881-41,641,787
(GRCh38/hg38)
Size:
3,907 bases
Orientation:
Plus strand

Genomic View for LOC105372812 Gene

Genes around LOC105372812 on UCSC Golden Path with GeneCards custom track
LOC105372812 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105372812 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372812 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372812 Gene

Proteins for LOC105372812 Gene

Post-translational modifications for LOC105372812 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372812 Gene

Domains & Families for LOC105372812 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372812 Gene

Function for LOC105372812 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372812 Gene

Localization for LOC105372812 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372812 Gene

Pathways & Interactions for LOC105372812 Gene

PathCards logo

SuperPathways for LOC105372812 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372812 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372812 Gene

Drugs & Compounds for LOC105372812 Gene

No Compound Related Data Available

Transcripts for LOC105372812 Gene

LOC105372812 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372812 Gene

No ASD Table

Relevant External Links for LOC105372812 Gene

GeneLoc Exon Structure for
LOC105372812

No data available for mRNA/cDNA for LOC105372812 Gene

Expression for LOC105372812 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372812 Gene

Orthologs for LOC105372812 Gene

No data available for Orthologs and Evolution for LOC105372812 Gene

Paralogs for LOC105372812 Gene

No data available for Paralogs for LOC105372812 Gene

Variants for LOC105372812 Gene

Additional dbSNP identifiers (rs#s) for LOC105372812 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372812 Gene

Disorders for LOC105372812 Gene

No disorders were found for LOC105372812 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372812 Gene

Publications for LOC105372812 Gene

No publications were found for LOC105372812 Gene.

No data available for Mastermind for LOC105372812 Gene

Products for LOC105372812 Gene

Sources for LOC105372812 Gene