LOC105372803 Gene (RNA Gene)

Uncharacterized LOC105372803

GC21P039011
GIFtS:
4

Aliases for LOC105372803 Gene

Subcategory (RNA class) for LOC105372803 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372803 Gene

  • Uncharacterized LOC105372803 3

External Ids for LOC105372803 Gene

Previous GeneCards Identifiers for LOC105372803 Gene

  • GC21U900618

Summaries for LOC105372803 Gene

GeneCards Summary for LOC105372803 Gene

LOC105372803 (Uncharacterized LOC105372803) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372803 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372803 Gene

Genomics for LOC105372803 Gene

GeneHancer (GH) Regulatory Elements for LOC105372803 Gene

Promoters and enhancers for LOC105372803 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH21J039009 Enhancer 0.4 dbSUPER 750.6 -0.5 -490 2.6 HLF CEBPG CEBPA ZFHX2 LOC105372803 lnc-ETS2-4 LOC102724740 LINC01700 ENSG00000235888
GH21J039014 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.3 5293 4.9 MLX HLF ELF3 IKZF1 CEBPA IKZF2 RXRB CEBPB JUN JUND piR-54300 ETS2 LOC102724740 piR-42491-144 LOC105372803 lnc-ETS2-4 ENSG00000235888
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372803 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372803 Gene

Genomic Locations for LOC105372803 Gene
chr21:39,011,235-39,015,106
(GRCh38/hg38)
Size:
3,872 bases
Orientation:
Plus strand

Genomic View for LOC105372803 Gene

Genes around LOC105372803 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372803 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372803 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105372803 Gene

Proteins for LOC105372803 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105372803 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372803 Gene

Domains & Families for LOC105372803 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372803 Gene

Function for LOC105372803 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LOC105372803 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372803 Gene

Localization for LOC105372803 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372803 Gene

Pathways & Interactions for LOC105372803 Gene

PathCards logo

SuperPathways for LOC105372803 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372803 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372803 Gene

Drugs & Compounds for LOC105372803 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105372803 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372803 Gene

No ASD Table

Relevant External Links for LOC105372803 Gene

GeneLoc Exon Structure for
LOC105372803

No data available for mRNA/cDNA for LOC105372803 Gene

Expression for LOC105372803 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372803 Gene

Orthologs for LOC105372803 Gene

No data available for Orthologs and Evolution for LOC105372803 Gene

Paralogs for LOC105372803 Gene

No data available for Paralogs for LOC105372803 Gene

Variants for LOC105372803 Gene

Sequence variations from dbSNP and Humsavar for LOC105372803 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1000201248 -- 39,010,759(+) C/G upstream_transcript_variant
rs1000657812 -- 39,011,914(+) G/C intron_variant
rs1002009666 -- 39,010,145(+) G/A upstream_transcript_variant
rs1002456412 -- 39,014,347(+) C/A/T intron_variant
rs1002856180 -- 39,013,103(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372803 Gene

Disorders for LOC105372803 Gene

No disorders were found for LOC105372803 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372803 Gene

Publications for LOC105372803 Gene

No publications were found for LOC105372803 Gene.

No data available for External Links for LOC105372803 Gene

Products for LOC105372803 Gene

Sources for LOC105372803 Gene