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Aliases for LOC105372802 Gene

Subcategory (RNA class) for LOC105372802 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372802 Gene

  • Uncharacterized LOC105372802 3

External Ids for LOC105372802 Gene

Previous GeneCards Identifiers for LOC105372802 Gene

  • GC21U900692

Summaries for LOC105372802 Gene

GeneCards Summary for LOC105372802 Gene

LOC105372802 (Uncharacterized LOC105372802) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372802 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372802 Gene

Genomics for LOC105372802 Gene

GeneHancer (GH) Regulatory Elements for LOC105372802 Gene

Promoters and enhancers for LOC105372802 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J038503 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 600.7 +1.8 1772 4 CTCF RAD21 CREB1 REST ZSCAN5C TEAD1 SMC3 NR2F2 ZNF654 JUND LOC105372802 GC21M038522 ERG GC21M038495
GH21J038501 Enhancer 0.2 dbSUPER 600.7 -1.5 -1504 1.5 SNRPGP13 LOC105372802 ERG PSMG1 GC21P038433 GC21M038495
GH21J038525 Enhancer 0.7 dbSUPER 0.3 +22.1 22059 0.8 ELF3 ZSCAN21 PPARG ZNF644 PRDM10 RXRB ZSCAN4 ZBTB26 SAP130 TEAD1 GC21M038522 ERG LOC105372802 GC21M038495
GH21J038520 Enhancer 0.6 Ensembl dbSUPER 0.4 +17.3 17261 0.2 PKNOX1 FOS HLF ERG GC21M038522 LOC105372802 GC21M038495
GH21J038530 Enhancer 0.4 dbSUPER 0.3 +27.7 27744 0.8 CREB1 ATF7 ATF2 GC21M038522 LOC105372802 GC21P038601 ERG GC21M038495
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372802 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372802 Gene

Genomic Locations for LOC105372802 Gene
chr21:38,503,440-38,543,341
(GRCh38/hg38)
Size:
39,902 bases
Orientation:
Plus strand

Genomic View for LOC105372802 Gene

Genes around LOC105372802 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372802 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372802 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372802 Gene

Proteins for LOC105372802 Gene

Post-translational modifications for LOC105372802 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372802 Gene

Domains & Families for LOC105372802 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372802 Gene

Function for LOC105372802 Gene

Phenotypes From GWAS Catalog for LOC105372802 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372802 Gene

Localization for LOC105372802 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372802 Gene

Pathways & Interactions for LOC105372802 Gene

PathCards logo

SuperPathways for LOC105372802 Gene

No Data Available

Interacting Proteins for LOC105372802 Gene

Gene Ontology (GO) - Biological Process for LOC105372802 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372802 Gene

Drugs & Compounds for LOC105372802 Gene

No Compound Related Data Available

Transcripts for LOC105372802 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372802 Gene

No ASD Table

Relevant External Links for LOC105372802 Gene

GeneLoc Exon Structure for
LOC105372802

No data available for mRNA/cDNA for LOC105372802 Gene

Expression for LOC105372802 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372802 Gene

Orthologs for LOC105372802 Gene

No data available for Orthologs and Evolution for LOC105372802 Gene

Paralogs for LOC105372802 Gene

No data available for Paralogs for LOC105372802 Gene

Variants for LOC105372802 Gene

Sequence variations from dbSNP and Humsavar for LOC105372802 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1000022187 -- 38,505,279(+) C/T intron_variant
rs1000059693 -- 38,505,487(+) T/C intron_variant
rs1000165720 -- 38,530,653(+) G/A intron_variant
rs1000182832 -- 38,502,310(+) AGGAG/AG upstream_transcript_variant
rs1000266098 -- 38,539,455(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372802 Gene

Disorders for LOC105372802 Gene

No disorders were found for LOC105372802 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372802 Gene

Publications for LOC105372802 Gene

No publications were found for LOC105372802 Gene.

No data available for External Links for LOC105372802 Gene

Products for LOC105372802 Gene

Sources for LOC105372802 Gene

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