Aliases for LOC105372793 Gene

Data sources for LOC105372793 Gene:

RNA type for LOC105372793 Gene

ncRNA

Aliases for LOC105372793 Gene

External Ids for LOC105372793 Gene

Previous GeneCards Identifiers for LOC105372793 Gene

  • GC21U900627

Summaries for LOC105372793 Gene

GeneCards Summary for LOC105372793 Gene

LOC105372793 (Uncharacterized LOC105372793) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372793 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372793 Gene

Genomics for LOC105372793 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372793 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J034405 Enhancer 0.8 FANTOM5 Ensembl ENCODE 250.7 +0.7 749 2.2 BHLHE40 SPI1 EGR2 RUNX3 KDM1A ENSG00000272958 LOC105372793 lnc-SMIM11A-1 RCAN1 SMIM11A FAM243A KCNE1 RPS5P2 SMIM34A MN298114-127
GH21J034417 Enhancer 0.7 ENCODE 0.4 +11.5 11527 0.1 BCL11A TRIM22 MCM3 IRF4 EBF1 ZBTB5 ZNF658 BHLHE40 BATF IRF5 SON GART RPS5P2 ENSG00000272958 ENSG00000273104 SMIM34A LOC105372793 FAM243A MN298114-127
GH21J034423 Promoter 0.7 EPDnew 0.4 +17.8 17805 0.1 TRIM28 ZEB2 ZSCAN21 ZNF692 OSR2 GFI1B PRDM10 TSHZ1 ZBTB11 ZBTB44 HSALNG0132847 SMIM34A ENSG00000273104 LOC105372793 ENSG00000272958 FAM243A MN298114-127
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372793 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372793 Gene

Latest Assembly
chr21:34,406,131-34,425,353
(GRCh38/hg38)
Size:
19,223 bases
Orientation:
Plus strand

Genomic View for LOC105372793 Gene

Genes around LOC105372793 on UCSC Golden Path with GeneCards custom track
LOC105372793 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105372793 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372793 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372793 Gene

Proteins for LOC105372793 Gene

Post-translational modifications for LOC105372793 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372793 Gene

Domains & Families for LOC105372793 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372793 Gene

Function for LOC105372793 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372793 Gene

Localization for LOC105372793 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372793 Gene

Pathways & Interactions for LOC105372793 Gene

PathCards logo

SuperPathways for LOC105372793 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372793 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372793 Gene

Drugs & Compounds for LOC105372793 Gene

No Compound Related Data Available

Transcripts for LOC105372793 Gene

LOC105372793 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

mRNA/cDNA for LOC105372793 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372793 Gene

No ASD Table

Relevant External Links for LOC105372793 Gene

GeneLoc Exon Structure for
LOC105372793

Expression for LOC105372793 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372793 Gene

Orthologs for LOC105372793 Gene

No data available for Orthologs and Evolution for LOC105372793 Gene

Paralogs for LOC105372793 Gene

No data available for Paralogs for LOC105372793 Gene

Variants for LOC105372793 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105372793 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372793 Gene

Disorders for LOC105372793 Gene

No disorders were found for LOC105372793 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372793 Gene

Publications for LOC105372793 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LOC105372793 Gene

Products for LOC105372793 Gene

Sources for LOC105372793 Gene