Aliases for LOC105372672 Gene

Subcategory (RNA class) for LOC105372672 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LOC105372672 Gene

  • Uncharacterized LOC105372672 3
  • Novel Transcript 5
  • NONHSAG032055.2 91
  • HSALNG0130937 164
  • Lnc-TSHZ2-2 165
  • AC005808.1 5

External Ids for LOC105372672 Gene

Previous GeneCards Identifiers for LOC105372672 Gene

  • GC20U901064

Summaries for LOC105372672 Gene

GeneCards Summary for LOC105372672 Gene

LOC105372672 (Uncharacterized LOC105372672) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105372672 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372672 Gene

Genomics for LOC105372672 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372672 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372672 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372672 Gene

Genomic Locations for LOC105372672 Gene
chr20:53,608,085-53,634,590
(GRCh38/hg38)
Size:
26,506 bases
Orientation:
Plus strand
chr20:52,224,893-52,251,129
(GRCh37/hg19)
Size:
26,237 bases
Orientation:
Plus strand

Genomic View for LOC105372672 Gene

Genes around LOC105372672 on UCSC Golden Path with GeneCards custom track
LOC105372672 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105372672 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372672 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372672 Gene

Proteins for LOC105372672 Gene

Post-translational modifications for LOC105372672 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372672 Gene

Domains & Families for LOC105372672 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372672 Gene

Function for LOC105372672 Gene

Phenotypes From GWAS Catalog for LOC105372672 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372672 Gene

Localization for LOC105372672 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372672 Gene

Pathways & Interactions for LOC105372672 Gene

PathCards logo

SuperPathways for LOC105372672 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372672 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372672 Gene

Drugs & Compounds for LOC105372672 Gene

No Compound Related Data Available

Transcripts for LOC105372672 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105372672 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002F9D8A_9606 lncRNA 381 5

RefSeq: NR_134576,

Ensembl: ENST00000444112 (view in UCSC) ,

LncBook: HSALNT0269053,

LNCipedia: lnc-TSHZ2-2:1,

NONCODE: NONHSAT080398.2,

URS00009BA22F_9606 lncRNA 380 2

LncBook: HSALNT0269054,

NONCODE: NONHSAT188963.1,

URS0000D5B87D_9606 lncRNA 1230 1

LNCipedia: lnc-TSHZ2-2:2,

LOC105372672 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC105372672 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372672 Gene

No ASD Table

Relevant External Links for LOC105372672 Gene

GeneLoc Exon Structure for
LOC105372672

Expression for LOC105372672 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372672 Gene

Orthologs for LOC105372672 Gene

Evolution for LOC105372672 Gene

ENSEMBL:
Gene Tree for LOC105372672 (if available)
TreeFam:
Gene Tree for LOC105372672 (if available)

No data available for Orthologs for LOC105372672 Gene

Paralogs for LOC105372672 Gene

No data available for Paralogs for LOC105372672 Gene

Variants for LOC105372672 Gene

Additional dbSNP identifiers (rs#s) for LOC105372672 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372672 Gene

Disorders for LOC105372672 Gene

No disorders were found for LOC105372672 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372672 Gene

Publications for LOC105372672 Gene

No publications were found for LOC105372672 Gene.

No data available for Mastermind for LOC105372672 Gene

Products for LOC105372672 Gene

Sources for LOC105372672 Gene