Aliases for LOC105372670 Gene

Subcategory (RNA class) for LOC105372670 Gene

ncRNA

Aliases for LOC105372670 Gene

  • Uncharacterized LOC105372670 3

External Ids for LOC105372670 Gene

Previous GeneCards Identifiers for LOC105372670 Gene

  • GC20U900955

Summaries for LOC105372670 Gene

GeneCards Summary for LOC105372670 Gene

LOC105372670 (Uncharacterized LOC105372670) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372670 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372670 Gene

Genomics for LOC105372670 Gene

GeneHancer (GH) Regulatory Elements for LOC105372670 Gene

Promoters and enhancers for LOC105372670 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J053399 Enhancer 0.4 Ensembl 500.7 +1.4 1376 1.6 ZBTB17 HLF ZNF579 CREB1 MYC LOC105372670 ENSG00000231703 ENSG00000271774 lnc-PFDN4-13 TSHZ2
GH20J053402 Enhancer 0.2 Ensembl 500.7 -1.4 -1424 0.4 LOC105372670 ENSG00000231703 ENSG00000271774 TSHZ2
GH20J053412 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas 0.4 -11.5 -11512 1.4 ZNF217 CTCF USF1 ZIC2 REST ZBTB25 RCOR1 RAD21 CTBP1 SKI ENSG00000231703 LOC105372670 ENSG00000271774 TSHZ2
GH20J053408 Enhancer 0.8 Ensembl ENCODE 0.4 -6.3 -6323 5.4 ZBTB17 CTCF CEBPG SPI1 ZNF335 IKZF3 FEZF1 ATF4 ZNF398 CEBPB ENSG00000231703 LOC105372670 ENSG00000271774 TSHZ2
GH20J053346 Enhancer 1.3 UCNEbase Ensembl ENCODE 0.2 +54.9 54927 2.1 ZNF217 EP300 CLOCK CUX1 GATAD2B CTBP1 SIN3A ESRRA MYC ZNF592 LOC105372670 lnc-PFDN4-13 ENSG00000271774 TSHZ2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372670 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372670 Gene

Genomic Locations for LOC105372670 Gene
chr20:53,399,262-53,401,377
(GRCh38/hg38)
Size:
2,116 bases
Orientation:
Minus strand

Genomic View for LOC105372670 Gene

Genes around LOC105372670 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372670 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372670 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LOC105372670 Gene

Proteins for LOC105372670 Gene

Post-translational modifications for LOC105372670 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372670 Gene

Domains & Families for LOC105372670 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372670 Gene

Function for LOC105372670 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372670 Gene

Localization for LOC105372670 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372670 Gene

Pathways & Interactions for LOC105372670 Gene

PathCards logo

SuperPathways for LOC105372670 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105372670 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372670 Gene

Drugs & Compounds for LOC105372670 Gene

No Compound Related Data Available

Transcripts for LOC105372670 Gene

mRNA/cDNA for LOC105372670 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372670 Gene

No ASD Table

Relevant External Links for LOC105372670 Gene

GeneLoc Exon Structure for
LOC105372670

Expression for LOC105372670 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372670 Gene

Orthologs for LOC105372670 Gene

No data available for Orthologs and Evolution for LOC105372670 Gene

Paralogs for LOC105372670 Gene

No data available for Paralogs for LOC105372670 Gene

Variants for LOC105372670 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372670 Gene

Disorders for LOC105372670 Gene

No disorders were found for LOC105372670 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372670 Gene

Publications for LOC105372670 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for LOC105372670 Gene

Products for LOC105372670 Gene

Sources for LOC105372670 Gene