Aliases for LOC105372666 Gene

Data sources for LOC105372666 Gene:

RNA type for LOC105372666 Gene

ncRNA

Aliases for LOC105372666 Gene

External Ids for LOC105372666 Gene

Previous GeneCards Identifiers for LOC105372666 Gene

  • GC20U900961
  • GC20P052540

Summaries for LOC105372666 Gene

GeneCards Summary for LOC105372666 Gene

LOC105372666 (Uncharacterized LOC105372666) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372666 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372666 Gene

Genomics for LOC105372666 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372666 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J052210 Promoter/Enhancer 1.1 EPDnew ENCODE 250.7 -0.1 -66 0.2 MYC SMAD5 TBP HCFC1 NBN ELF1 ATF1 SUPT5H ETV1 NCOA1 HSALNG0130878-001 LOC105372666 LINC01524 ZFP64 TSHZ2
GH20J052209 Enhancer 0.9 Ensembl ENCODE 250.7 -1.0 -1033 1.6 MYC SMAD5 NBN ELF1 SUPT5H EP400 NRF1 TAF7 POLR2A ZBTB40 HSALNG0130878-001 LOC105372666 ZFP64 LINC01524 TSHZ2
GH20J052231 Enhancer 0.8 ENCODE 0.4 +20.8 20823 0.2 CEBPA CHD4 YY1 HOMEZ FOXA2 KDM6A MAFF RXRA ZNF511 SAP130 piR-60146-096 HSALNG0130878-001 HSALNG0130879 LOC105372666 ZFP64 LINC01524 TSHZ2
GH20J052308 Enhancer 0.9 Ensembl ENCODE 0.2 +100.7 100667 5.4 EZH2 ZNF654 YY1 TRIM22 CTCF MAFF RAD21 SMC3 ZNF316 TEAD3 piR-43107-189 TSHZ2 ZFP64 lnc-ZFP64-7 HSALNG0130878-001 LOC105372666 LINC01524
GH20J052269 Enhancer 0.5 Ensembl 0.2 +59.0 58994 1.1 GABPA SPI1 MYC MAX POLR2A CHD2 HSALNG0130880 lnc-ZFP64-7 HSALNG0130878-001 LOC105372666 ZFP64 LINC01524 TSHZ2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372666 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372666 Gene

Latest Assembly
chr20:52,210,634-52,693,843
(GRCh38/hg38)
Size:
483,210 bases
Orientation:
Plus strand

Genomic View for LOC105372666 Gene

Genes around LOC105372666 on UCSC Golden Path with GeneCards custom track
LOC105372666 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105372666 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372666 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372666 Gene

Proteins for LOC105372666 Gene

Post-translational modifications for LOC105372666 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372666 Gene

Domains & Families for LOC105372666 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372666 Gene

Function for LOC105372666 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372666 Gene

Localization for LOC105372666 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372666 Gene

Pathways & Interactions for LOC105372666 Gene

PathCards logo

SuperPathways for LOC105372666 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372666 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372666 Gene

Drugs & Compounds for LOC105372666 Gene

No Compound Related Data Available

Transcripts for LOC105372666 Gene

LOC105372666 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372666 Gene

No ASD Table

Relevant External Links for LOC105372666 Gene

GeneLoc Exon Structure for
LOC105372666

No data available for mRNA/cDNA for LOC105372666 Gene

Expression for LOC105372666 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105372666

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372666 Gene

Orthologs for LOC105372666 Gene

No data available for Orthologs and Evolution for LOC105372666 Gene

Paralogs for LOC105372666 Gene

No data available for Paralogs for LOC105372666 Gene

Variants for LOC105372666 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105372666 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372666 Gene

Disorders for LOC105372666 Gene

No disorders were found for LOC105372666 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372666 Gene

Publications for LOC105372666 Gene

No publications were found for LOC105372666 Gene.

No data available for Mastermind for LOC105372666 Gene

Products for LOC105372666 Gene

Sources for LOC105372666 Gene