Aliases for LOC105372657 Gene

Subcategory (RNA class) for LOC105372657 Gene

ncRNA

Aliases for LOC105372657 Gene

  • Uncharacterized LOC105372657 3

External Ids for LOC105372657 Gene

Previous GeneCards Identifiers for LOC105372657 Gene

  • GC20U900925

Summaries for LOC105372657 Gene

GeneCards Summary for LOC105372657 Gene

LOC105372657 (Uncharacterized LOC105372657) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372657 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372657 Gene

Genomics for LOC105372657 Gene

GeneHancer (GH) Regulatory Elements for LOC105372657 Gene

Promoters and enhancers for LOC105372657 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J050345 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.7 -2.9 -2925 4.3 SP1 AFF1 TGIF2 CTBP1 TEAD1 ZBTB26 ZKSCAN8 GATAD2B MXI1 RBM25 CEBPB ADNP DPM1 PTPN1 SPATA2 SNAI1 LOC105372657 RF00005-109
GH20J050354 Enhancer 1 ENCODE dbSUPER 0.7 +4.4 4392 1.5 ZNF217 USF1 RFX1 REST KLF4 CUX1 CTBP1 EP300 ZBTB26 GATAD2B ADNP LINC01273 SNAI1 LOC105372657 lnc-TMEM189-7
GH20J050353 Enhancer 1 ENCODE dbSUPER 0.7 +3.1 3081 0.2 ZBTB25 TGIF2 SKI ZSCAN9 NR2F2 HES1 KAT7 USF1 SAP130 ZNF205 LOC105372657 lnc-TMEM189-7
GH20J050338 Enhancer 1.4 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -11.4 -11419 2.2 EP300 CTCF FOS ZNF623 CUX1 ZBTB7A TRIM22 ZKSCAN8 EZH2 BCL11A CEBPB PTPN1 LINC01273 SNAI1 RNF114 RF00005-109 LOC105372657
GH20J050359 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +9.5 9502 2.8 ZNF217 ZNF10 KLF4 CHD1 GATAD2B CTBP1 SIN3A ESRRA MYC CTCF ADNP DPM1 SNAI1 PTPN1 lnc-TMEM189-7 LOC105372657
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372657 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372657 Gene

Genomic Locations for LOC105372657 Gene
chr20:50,350,698-50,368,831
(GRCh38/hg38)
Size:
18,134 bases
Orientation:
Plus strand

Genomic View for LOC105372657 Gene

Genes around LOC105372657 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372657 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372657 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372657 Gene

Proteins for LOC105372657 Gene

Post-translational modifications for LOC105372657 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372657 Gene

Domains & Families for LOC105372657 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372657 Gene

Function for LOC105372657 Gene

Phenotypes From GWAS Catalog for LOC105372657 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372657 Gene

Localization for LOC105372657 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372657 Gene

Pathways & Interactions for LOC105372657 Gene

PathCards logo

SuperPathways for LOC105372657 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105372657 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372657 Gene

Drugs & Compounds for LOC105372657 Gene

No Compound Related Data Available

Transcripts for LOC105372657 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372657 Gene

No ASD Table

Relevant External Links for LOC105372657 Gene

GeneLoc Exon Structure for
LOC105372657

No data available for mRNA/cDNA for LOC105372657 Gene

Expression for LOC105372657 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372657 Gene

Orthologs for LOC105372657 Gene

No data available for Orthologs and Evolution for LOC105372657 Gene

Paralogs for LOC105372657 Gene

No data available for Paralogs for LOC105372657 Gene

Variants for LOC105372657 Gene

Additional dbSNP identifiers (rs#s) for LOC105372657 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372657 Gene

Disorders for LOC105372657 Gene

No disorders were found for LOC105372657 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372657 Gene

Publications for LOC105372657 Gene

No publications were found for LOC105372657 Gene.

No data available for Mastermind for LOC105372657 Gene

Products for LOC105372657 Gene

Sources for LOC105372657 Gene