Aliases for LOC105372656 Gene

Subcategory (RNA class) for LOC105372656 Gene

ncRNA

Aliases for LOC105372656 Gene

  • Uncharacterized LOC105372656 3

External Ids for LOC105372656 Gene

Previous GeneCards Identifiers for LOC105372656 Gene

  • GC20U901073

Summaries for LOC105372656 Gene

GeneCards Summary for LOC105372656 Gene

LOC105372656 (Uncharacterized LOC105372656) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372656 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372656 Gene

Genomics for LOC105372656 Gene

GeneHancer (GH) Regulatory Elements for LOC105372656 Gene

Promoters and enhancers for LOC105372656 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J050250 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 500.7 -0.7 -703 2.8 GATAD2B ZNF341 RBM25 HES1 MYC KDM1A ELK1 FOXA2 ZNF592 ZKSCAN1 LOC105372656 CEBPB SNAI1 SLC9A8 PTPN1 PSMD10P1 TMEM189 RNF114 SMIM25 lnc-TMEM189-2
GH20J050258 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.4 +7.3 7307 3.4 TCF12 BCLAF1 NONO ZBTB10 ZNF623 FOXA1 NFRKB TRIM25 GATAD2B ZKSCAN8 CEBPB ENSG00000232043 SNAI1 ADNP DPM1 MIR645 SNORD12B PSMD10P1 TMEM189 SLC9A8
GH20J050256 Enhancer 0.9 ENCODE dbSUPER 0.7 +4.1 4056 1.2 ZNF217 CTCF GATAD2B CTBP1 ZNF341 RBM25 ESRRA MYC ELF1 SIX4 LINC01273 LINC01270 LOC105372656 SMIM25 piR-57133-374 lnc-TMEM189-2
GH20J050266 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +14.9 14907 2.3 EP300 ZNF217 CTCF ZIC2 KLF4 ZBTB25 ZBTB7A RBM25 ESRRA NFIC piR-57133-374 SMIM25 CEBPB lnc-TMEM189-2 LOC105372656
GH20J050249 Enhancer 0.6 dbSUPER 0.7 -3.0 -3031 1 FOXA2 RBM25 MYC BCOR GATA3 ZMYM3 ZNF768 RXRA HNF4A HDAC2 PSMD10P1 LOC105372656 SMIM25 lnc-TMEM189-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372656 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372656 Gene

Genomic Locations for LOC105372656 Gene
chr20:50,252,723-50,264,246
(GRCh38/hg38)
Size:
11,524 bases
Orientation:
Plus strand

Genomic View for LOC105372656 Gene

Genes around LOC105372656 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372656 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372656 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372656 Gene

Proteins for LOC105372656 Gene

Post-translational modifications for LOC105372656 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372656 Gene

Domains & Families for LOC105372656 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372656 Gene

Function for LOC105372656 Gene

Phenotypes From GWAS Catalog for LOC105372656 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372656 Gene

Localization for LOC105372656 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372656 Gene

Pathways & Interactions for LOC105372656 Gene

PathCards logo

SuperPathways for LOC105372656 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105372656 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372656 Gene

Drugs & Compounds for LOC105372656 Gene

No Compound Related Data Available

Transcripts for LOC105372656 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372656 Gene

No ASD Table

Relevant External Links for LOC105372656 Gene

GeneLoc Exon Structure for
LOC105372656

No data available for mRNA/cDNA for LOC105372656 Gene

Expression for LOC105372656 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105372656

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372656 Gene

Orthologs for LOC105372656 Gene

No data available for Orthologs and Evolution for LOC105372656 Gene

Paralogs for LOC105372656 Gene

No data available for Paralogs for LOC105372656 Gene

Variants for LOC105372656 Gene

Additional dbSNP identifiers (rs#s) for LOC105372656 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372656 Gene

Disorders for LOC105372656 Gene

No disorders were found for LOC105372656 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372656 Gene

Publications for LOC105372656 Gene

No publications were found for LOC105372656 Gene.

No data available for Mastermind for LOC105372656 Gene

Products for LOC105372656 Gene

Sources for LOC105372656 Gene