Aliases for LOC105372648 Gene

Subcategory (RNA class) for LOC105372648 Gene

ncRNA

Aliases for LOC105372648 Gene

  • Uncharacterized LOC105372648 3

External Ids for LOC105372648 Gene

Previous GeneCards Identifiers for LOC105372648 Gene

  • GC20U901034

Summaries for LOC105372648 Gene

GeneCards Summary for LOC105372648 Gene

LOC105372648 (Uncharacterized LOC105372648) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372648 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372648 Gene

Genomics for LOC105372648 Gene

GeneHancer (GH) Regulatory Elements for LOC105372648 Gene

Promoters and enhancers for LOC105372648 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J048889 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE 500.7 -0.9 -915 1.8 EP300 RELA TOE1 TAF9B RBM25 BCL11A MYC ZNF282 ARNT CREB3L1 PREX1 LOC105372648 ARFGEF2 CSE1L lnc-ARFGEF2-5
GH20J048892 Enhancer 1 Ensembl ENCODE 0.7 -3.8 -3793 2.9 BCLAF1 ZBTB5 ZIC2 CHD1 TRIM22 GATAD2B CTBP1 HCFC1 ZNF282 SIN3A ARFGEF2 PREX1 CSE1L STAU1 LOC105372648 lnc-ARFGEF2-5
GH20J048904 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas 0.4 -17.4 -17428 2.8 RXRA ZNF217 CTCF TCF12 RFX1 REST CUX1 MYC CHD1 RAD21 lnc-ARFGEF2-5 CSE1L DDX27 SNORD12B ZFAS1 LOC105372648
GH20J048870 Enhancer 1.1 Ensembl ENCODE 0.4 +14.2 14172 8.4 FOXK2 ZBTB40 ZNF217 USF1 NCOR1 REST KLF4 CUX1 CTBP1 GATAD2B HSALNG0130639 PREX1 DDX27 ARFGEF2 STAU1 LOC105372648 ENSG00000278231
GH20J048896 Enhancer 1 Ensembl ENCODE 0.4 -11.6 -11609 5.6 ZNF217 TCF12 JUND FOS POLR2A RFX1 CUX1 CHD1 GATAD2B CTBP1 PREX1 DDX27 CSE1L STAU1 lnc-ARFGEF2-5 LOC105372648
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372648 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372648 Gene

Genomic Locations for LOC105372648 Gene
chr20:48,835,602-48,888,173
(GRCh38/hg38)
Size:
52,572 bases
Orientation:
Minus strand

Genomic View for LOC105372648 Gene

Genes around LOC105372648 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372648 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372648 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372648 Gene

Proteins for LOC105372648 Gene

Post-translational modifications for LOC105372648 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372648 Gene

Domains & Families for LOC105372648 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372648 Gene

Function for LOC105372648 Gene

Phenotypes From GWAS Catalog for LOC105372648 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372648 Gene

Localization for LOC105372648 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372648 Gene

Pathways & Interactions for LOC105372648 Gene

PathCards logo

SuperPathways for LOC105372648 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105372648 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372648 Gene

Drugs & Compounds for LOC105372648 Gene

No Compound Related Data Available

Transcripts for LOC105372648 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372648 Gene

No ASD Table

Relevant External Links for LOC105372648 Gene

GeneLoc Exon Structure for
LOC105372648

No data available for mRNA/cDNA for LOC105372648 Gene

Expression for LOC105372648 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372648 Gene

Orthologs for LOC105372648 Gene

No data available for Orthologs and Evolution for LOC105372648 Gene

Paralogs for LOC105372648 Gene

No data available for Paralogs for LOC105372648 Gene

Variants for LOC105372648 Gene

Additional dbSNP identifiers (rs#s) for LOC105372648 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372648 Gene

Disorders for LOC105372648 Gene

No disorders were found for LOC105372648 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372648 Gene

Publications for LOC105372648 Gene

No publications were found for LOC105372648 Gene.

No data available for Mastermind for LOC105372648 Gene

Products for LOC105372648 Gene

Sources for LOC105372648 Gene