Aliases for LOC105372646 Gene

Subcategory (RNA class) for LOC105372646 Gene

ncRNA

Aliases for LOC105372646 Gene

  • Uncharacterized LOC105372646 3

External Ids for LOC105372646 Gene

Previous GeneCards Identifiers for LOC105372646 Gene

  • GC20U900966

Summaries for LOC105372646 Gene

GeneCards Summary for LOC105372646 Gene

LOC105372646 (Uncharacterized LOC105372646) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372646 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372646 Gene

Genomics for LOC105372646 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372646 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J048537 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.4 +24.5 24526 2.2 CREB1 ARID3A HES1 ZNF512B SMARCA5 BMI1 CTBP1 NR3C1 MLLT1 PKNOX1 piR-48965-082 piR-58529 piR-47982 LOC105372646 lnc-PREX1-8 PREX1 SULF2
GH20J048559 Enhancer 0.5 Ensembl 0.7 +4.0 4007 0.4 RFX1 BMI1 PKNOX1 NFIB ZNF687 ZBTB7B piR-51733 LOC105372646 lnc-PREX1-8 PREX1 SULF2
GH20J048550 Enhancer 0.6 Ensembl 0.4 +12.4 12408 0.4 ZNF692 ZBTB20 DDX20 ESRRA ZNF217 DPF2 ZFP69B FOSL2 RFX5 MAZ piR-38179 piR-40588 LOC105372646 lnc-PREX1-8 PREX1 SULF2
GH20J048543 Enhancer 0.7 Ensembl 0.4 +21.5 21507 0.2 RELA TCF12 IKZF2 EED ARID3A ZSCAN29 DPF2 RELB RUNX3 GATAD2B piR-45515 piR-48965-082 piR-58067 piR-58698 LOC105372646 lnc-PREX1-8 PREX1 SULF2
GH20J048556 Enhancer 0.3 CraniofacialAtlas 0.4 +6.5 6545 0.4 GLIS1 MYC piR-51733 piR-38179 LOC105372646 lnc-PREX1-8 PREX1 SULF2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372646 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372646 Gene

Genomic Locations for LOC105372646 Gene
chr20:48,526,360-48,563,408
(GRCh38/hg38)
Size:
37,049 bases
Orientation:
Minus strand

Genomic View for LOC105372646 Gene

Genes around LOC105372646 on UCSC Golden Path with GeneCards custom track
LOC105372646 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105372646 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372646 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372646 Gene

Proteins for LOC105372646 Gene

Post-translational modifications for LOC105372646 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372646 Gene

Domains & Families for LOC105372646 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372646 Gene

Function for LOC105372646 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372646 Gene

Localization for LOC105372646 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372646 Gene

Pathways & Interactions for LOC105372646 Gene

PathCards logo

SuperPathways for LOC105372646 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372646 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372646 Gene

Drugs & Compounds for LOC105372646 Gene

No Compound Related Data Available

Transcripts for LOC105372646 Gene

LOC105372646 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372646 Gene

No ASD Table

Relevant External Links for LOC105372646 Gene

GeneLoc Exon Structure for
LOC105372646

No data available for mRNA/cDNA for LOC105372646 Gene

Expression for LOC105372646 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372646 Gene

Orthologs for LOC105372646 Gene

No data available for Orthologs and Evolution for LOC105372646 Gene

Paralogs for LOC105372646 Gene

No data available for Paralogs for LOC105372646 Gene

Variants for LOC105372646 Gene

Additional dbSNP identifiers (rs#s) for LOC105372646 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372646 Gene

Disorders for LOC105372646 Gene

No disorders were found for LOC105372646 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372646 Gene

Publications for LOC105372646 Gene

No publications were found for LOC105372646 Gene.

No data available for Mastermind for LOC105372646 Gene

Products for LOC105372646 Gene

Sources for LOC105372646 Gene