LOC105372637 Gene (RNA Gene)

Uncharacterized LOC105372637

GC20P047951
GIFtS:
4

Aliases for LOC105372637 Gene

Subcategory (RNA class) for LOC105372637 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372637 Gene

  • Uncharacterized LOC105372637 3

External Ids for LOC105372637 Gene

Previous GeneCards Identifiers for LOC105372637 Gene

  • GC20U901030

Summaries for LOC105372637 Gene

GeneCards Summary for LOC105372637 Gene

LOC105372637 (Uncharacterized LOC105372637) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372637 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372637 Gene

Genomics for LOC105372637 Gene

GeneHancer (GH) Regulatory Elements for LOC105372637 Gene

Promoters and enhancers for LOC105372637 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH20J047949 Enhancer 0.9 Ensembl ENCODE 750.6 -0.2 -209 3.6 ZBTB6 MNT NFIB MAFK SP7 MYC CREB1 ZIC2 PKNOX1 ZNF561 ENSG00000234967 LOC105372637 ENSG00000229853 NCOA3 ENSG00000228503 SULF2 RF00066-118 RNU7-92P
GH20J047956 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.4 +6.6 6607 3.1 HLF MTA3 NFIB AHR NCOA3 MYC ARID3A HDGF FOSL2 CREB1 ENSG00000228503 ENSG00000229853 NCOA3 LOC105372637
GH20J047953 Enhancer 0.7 Ensembl 0.6 +2.6 2591 0.4 MTA3 YBX1 NRF1 ZBTB33 HES1 RFX1 BMI1 ZKSCAN1 ESRRA ZNF592 ENSG00000229853 NCOA3 ENSG00000228503 ENSG00000234967 LOC105372637
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372637 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372637 Gene

Genomic Locations for LOC105372637 Gene
chr20:47,950,810-47,961,287
(GRCh38/hg38)
Size:
10,478 bases
Orientation:
Plus strand

Genomic View for LOC105372637 Gene

Genes around LOC105372637 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372637 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372637 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105372637 Gene

Proteins for LOC105372637 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105372637 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372637 Gene

Domains & Families for LOC105372637 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372637 Gene

Function for LOC105372637 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LOC105372637 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372637 Gene

Localization for LOC105372637 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372637 Gene

Pathways & Interactions for LOC105372637 Gene

PathCards logo

SuperPathways for LOC105372637 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372637 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372637 Gene

Drugs & Compounds for LOC105372637 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105372637 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for LOC105372637 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372637 Gene

No ASD Table

Relevant External Links for LOC105372637 Gene

GeneLoc Exon Structure for
LOC105372637

Expression for LOC105372637 Gene

Products:

  1. Primer
  2. Gene Expression Assay

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372637 Gene

Orthologs for LOC105372637 Gene

No data available for Orthologs and Evolution for LOC105372637 Gene

Paralogs for LOC105372637 Gene

No data available for Paralogs for LOC105372637 Gene

Variants for LOC105372637 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Sequence variations from dbSNP and Humsavar for LOC105372637 Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs1000087576 -- 47,953,981(+) G/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000498862 -- 47,958,064(+) C/G non_coding_transcript_variant
rs1000511171 -- 47,955,520(+) C/T intron_variant, non_coding_transcript_variant
rs1000543616 -- 47,955,861(+) A/G intron_variant, non_coding_transcript_variant
rs1000718458 -- 47,949,446(+) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372637 Gene

Disorders for LOC105372637 Gene

No disorders were found for LOC105372637 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372637 Gene

Publications for LOC105372637 Gene

No publications were found for LOC105372637 Gene.

No data available for External Links for LOC105372637 Gene

Products for LOC105372637 Gene

Sources for LOC105372637 Gene